| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0777 |
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| Symbol | |
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| ID | 4810395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 939329 |
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| End bp | 941941 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640106194 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001037205 |
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| Protein GI | 125973295 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.235285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCAT TGACACCTAT GATGCAACAG TATCTTGAAA TAAAGGAGCA GTACAAGGAC
TGTATCCTTT TTTTCAGATT GGGAGACTTT TATGAAATGT TTTTCTCTGA CGCGGAAGTA
GCTTCAAGGG AACTGGAAAT AACGCTTACG GGAAAAGATT GCGGCCTTGA AGAGAGAGCT
CCCATGTGCG GAGTGCCTTT TCATTCAGCG GATTCATATA TTGCGAAACT GATTAGCAAA
GGTTATAAAG TTGCGATATG TGAGCAGATT GAAGATCCTG CGCTGGCAAA AGGATTGGTC
AAGAGGGACG TAATCAGGAT TGTTACTCCC GGTACAGTGA CCGATTCCGC TATGTTGGAT
GAAAAAAAGA ATAACTATCT TATGTCGATT TATAAAAACA AAAACTATTA CGGTATTGCA
TGTGTTGATC TTACCACAGG AGAGTTTTTG TCGACACACA TTACCTTCGG CAACACTTTC
AACAAATTAA TGGATGAAAT AGCGAAATTC TCACCATCGG AAATTGTTGT AAACGGTGAG
TTTTTTCATG ACGAAAACAT CAAAAAGACT TTAAAACAAA GGTTTGATGT TTATATCTCC
GGTTTGGAGG ACAAATTTTT TGAAAAGGAG TTTTCCATAC AGAAGGTAAG AAATTATTTT
AAGGATTATG TGATTGAAGA AAATGCGTTT GATTTATACA TAAATGCTTC CGGAGCTCTT
TTGGAATATT TGGAGCAGAC GCAGAAAGTG AATTTAAGCC ATATTCAGAA TTTTAACGTC
TACAGGATTG AAGAGTACAT GATTCTGGAC ATGGCCACCA GAAGAAACCT TGAACTTACG
GAGACCATGA GGGAAAAGAA CAGAAAAGGC TCCCTTCTTT GGGTTTTGGA CAGAACCATG
ACCTCCATGG GCGGAAGAAC CCTGAGAAAA TGGATTGAAC AGCCCCTTAT AAACCTCCAT
GATATAAAGG ACAGGCTTGA TGCGGTAAAC GAGTTTAAAG AAAGGTTTAT GATAAGAAGC
GAAGTACGGG AGCTTTTAAG AGCGGTTTAT GACATTGAGA GGCTGATGAC AAAGGTTATT
CTGGGAAGTG CCAATTGCCG CGATTTGATA TCGATAAAAC ACTCTATCGG ACAGGTTCCG
TATATAAAGG AGCTTCTTCG TGATTTAAAA GCCGATCTTA ATGTTTTAAG CTACAATGAA
TTGGATACAC TAACTGATGT GTATGAAATT ATTGACAAGG CTATAGTCGA TGACCCGCCT
GTTGCGGTTA AAGAAGGCGG AATCATAAAA GAAGGTTTTA ATGAGGAGGT GGACAGGCTA
AGAAGCGCAT CAAAAGACGG AAAGAAGTGG ATTGCACATT TAGAGAGCAA AGAGAGGGAA
AGAACCGGTA TTAAAAATTT GAAAGTGGGA TTTAACAAGG TTTTCGGCTA TTACATTGAA
GTGACCAAAT CCTACTACTC ACAAGTACCG GATGATTATA TAAGGAAACA GACCTTGGCG
AACTGCGAAA GGTACATAAC ACCGGAGCTG AAGGAAATTG AAAATACCGT ATTGGGTGCG
GAGGACAGGC TTGTAGAGCT TGAATATCAG ATATTTGTGG ATGTGAGGAA CAAGGTTGCA
AAAGAAATAA ACAGATTAAA GACCACGGCA AGAAGTCTTG CCAGAATCGA TGTTTTATGC
TCACTGGCGG AAGTGGCGGA CAGGGAATCC TATACTATGC CGGAAGTGAC CGATGACGAC
AAAATTGAAA TTAAAGACGG AAGGCATCCT GTGGTAGAGA AGATAATCGG GCAGGAAGCC
TTTGTTCCCA ATGATACCTA TCTTGACATG GATGAAAACC AAATTGCTAT AATTACCGGG
CCTAATATGG CGGGTAAGTC GACATATATG CGGCAGGTGG CGTTGATTGT GCTTATGGCC
CAAATAGGAA GCTTTGTTCC CGCCAAAAGT GCCAAAATAG GCATAGTTGA CAGGATATTT
ACAAGGGTAG GCGCTTCGGA TGACCTGGCA GCAGGCCAGA GTACCTTTAT GGTGGAAATG
TCCGAAGTTG CGAATATCCT TGGCAATGCC ACGTCAAAAA GCCTGTTGGT ATTGGATGAG
ATAGGCAGGG GTACAAGCAC CTATGACGGA CTGAGTATCG CATGGGCTGT AATTGAGTAT
ATCGGTGAGA AGATAGGGGC AAGAACGCTC TTTGCCACCC ATTACCATGA ACTTACCGAA
CTGGAAGAAA GAATTGAAGG AATAAAGAAT TATTGCATAT CCGTGGAGGA AAAGGGAGAA
GATATAATTT TCTTAAGAAA AATACTCAGG GGCGGAGCCG ACAACAGCTA CGGCGTGCAG
GTTGCAAGGC TTGCAGGCAT ACCGGATCCT GTTATTCACA GGGCAAAAGA AATATTAAAA
AAATTGGAAG ATGCGGACAT AACCAGGAAG GAAAAACGTA TTACAAGGAG AAAACAGCCC
ATTGAGGGGC AAATTGACGT ATTTACGTTT AACGCCGCCC AGAGAAGTTA TGATGAGGTT
CTGAATGAAT TAAAGAGTCT TGATATTACG ACTTTGACAC CGCTTGATGC AATAAATGTA
TTATACAATC TTCAAAAAAA GGTAAAAGGG TAG
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| Protein sequence | MASLTPMMQQ YLEIKEQYKD CILFFRLGDF YEMFFSDAEV ASRELEITLT GKDCGLEERA
PMCGVPFHSA DSYIAKLISK GYKVAICEQI EDPALAKGLV KRDVIRIVTP GTVTDSAMLD
EKKNNYLMSI YKNKNYYGIA CVDLTTGEFL STHITFGNTF NKLMDEIAKF SPSEIVVNGE
FFHDENIKKT LKQRFDVYIS GLEDKFFEKE FSIQKVRNYF KDYVIEENAF DLYINASGAL
LEYLEQTQKV NLSHIQNFNV YRIEEYMILD MATRRNLELT ETMREKNRKG SLLWVLDRTM
TSMGGRTLRK WIEQPLINLH DIKDRLDAVN EFKERFMIRS EVRELLRAVY DIERLMTKVI
LGSANCRDLI SIKHSIGQVP YIKELLRDLK ADLNVLSYNE LDTLTDVYEI IDKAIVDDPP
VAVKEGGIIK EGFNEEVDRL RSASKDGKKW IAHLESKERE RTGIKNLKVG FNKVFGYYIE
VTKSYYSQVP DDYIRKQTLA NCERYITPEL KEIENTVLGA EDRLVELEYQ IFVDVRNKVA
KEINRLKTTA RSLARIDVLC SLAEVADRES YTMPEVTDDD KIEIKDGRHP VVEKIIGQEA
FVPNDTYLDM DENQIAIITG PNMAGKSTYM RQVALIVLMA QIGSFVPAKS AKIGIVDRIF
TRVGASDDLA AGQSTFMVEM SEVANILGNA TSKSLLVLDE IGRGTSTYDG LSIAWAVIEY
IGEKIGARTL FATHYHELTE LEERIEGIKN YCISVEEKGE DIIFLRKILR GGADNSYGVQ
VARLAGIPDP VIHRAKEILK KLEDADITRK EKRITRRKQP IEGQIDVFTF NAAQRSYDEV
LNELKSLDIT TLTPLDAINV LYNLQKKVKG
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