Gene Cthe_0775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0775 
SymbolmiaA 
ID4810393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp936033 
End bp936974 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content37% 
IMG OID640106192 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_001037203 
Protein GI125973293 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000929086 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACAACG TACTTGTGAT AATCGGTCCG ACAGCTTCGG GAAAGACGAA GCTTGCCATA 
GAGATAGCCA AGCGTGCAAA CGGTGAGATA ATTTCTGCGG ATTCCATGCA GATTTACAAA
TATATGGACA TAGGTACGGC AAAACCCGAC GAAGAAGAAA AAGAAGGTAT AAAGCACTAT
CTTATAGATG AAGTGACGCC GGATGAAGAG TTTAGCGTTG CAAGGTTTAA AGAGCTTGCT
TTAAAATATA TTGACGAAAT TTTAAGCAAG GGCAAGCTTC CCATAGTTGC CGGAGGAACA
GGACTTTATA TTAATTCACT AATATATAAT CTTGAATTTT CCGATACTAT TTGTGATTGG
GAGCTTAGAA AGAAACTTGA ACAGGAAGCA AAAGAAAAAG GCAACGAATA TCTTCACAAC
AAGCTTAAAG AGATTGACCC TAAAGCAGCG GAAAAAATAC ATATGAACAA TGTAAAAAGG
GTAATACGGG CAATAGAAGT GTATACTTAC ACAAAGAAGC CTATTTCCGT TCATCAGGAG
GAGTCGAGAA AGAATCCTCC CAGGCACAAT TTTATATTAA TCGGTATTAC AATGGACAGA
GAAAAGCTAT ATGACCGAAT CAACAAAAGA GTGGATTTGA TGCTTGAAAA AGGACTTGTC
AAAGAGGTTG AGAAACTTGT TGAAATGGGA TATGATAAAA GTACGATTGC CATGCAAGGG
CTCGGGTACA AGGAAATATT ATCTTACTTA AGAGGAGAGA GAAGCCTTGA TGAGGCAGTT
GAAATTTTAA AGAGAGATAC AAGGCGATAT GCCAAACGCC AGATGACGTG GTTTAGGAAA
ATTGAAAATG TTTACTGGAT AAACAAAGAT GAGTTTGACA GTGATGAGAA AATAATAAAA
AATCTTAAAT ATTATCTTGC AACGTTTGGT ATTTTCTTGT AG
 
Protein sequence
MDNVLVIIGP TASGKTKLAI EIAKRANGEI ISADSMQIYK YMDIGTAKPD EEEKEGIKHY 
LIDEVTPDEE FSVARFKELA LKYIDEILSK GKLPIVAGGT GLYINSLIYN LEFSDTICDW
ELRKKLEQEA KEKGNEYLHN KLKEIDPKAA EKIHMNNVKR VIRAIEVYTY TKKPISVHQE
ESRKNPPRHN FILIGITMDR EKLYDRINKR VDLMLEKGLV KEVEKLVEMG YDKSTIAMQG
LGYKEILSYL RGERSLDEAV EILKRDTRRY AKRQMTWFRK IENVYWINKD EFDSDEKIIK
NLKYYLATFG IFL