Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0775 |
Symbol | miaA |
ID | 4810393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 936033 |
End bp | 936974 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640106192 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_001037203 |
Protein GI | 125973293 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000929086 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACAACG TACTTGTGAT AATCGGTCCG ACAGCTTCGG GAAAGACGAA GCTTGCCATA GAGATAGCCA AGCGTGCAAA CGGTGAGATA ATTTCTGCGG ATTCCATGCA GATTTACAAA TATATGGACA TAGGTACGGC AAAACCCGAC GAAGAAGAAA AAGAAGGTAT AAAGCACTAT CTTATAGATG AAGTGACGCC GGATGAAGAG TTTAGCGTTG CAAGGTTTAA AGAGCTTGCT TTAAAATATA TTGACGAAAT TTTAAGCAAG GGCAAGCTTC CCATAGTTGC CGGAGGAACA GGACTTTATA TTAATTCACT AATATATAAT CTTGAATTTT CCGATACTAT TTGTGATTGG GAGCTTAGAA AGAAACTTGA ACAGGAAGCA AAAGAAAAAG GCAACGAATA TCTTCACAAC AAGCTTAAAG AGATTGACCC TAAAGCAGCG GAAAAAATAC ATATGAACAA TGTAAAAAGG GTAATACGGG CAATAGAAGT GTATACTTAC ACAAAGAAGC CTATTTCCGT TCATCAGGAG GAGTCGAGAA AGAATCCTCC CAGGCACAAT TTTATATTAA TCGGTATTAC AATGGACAGA GAAAAGCTAT ATGACCGAAT CAACAAAAGA GTGGATTTGA TGCTTGAAAA AGGACTTGTC AAAGAGGTTG AGAAACTTGT TGAAATGGGA TATGATAAAA GTACGATTGC CATGCAAGGG CTCGGGTACA AGGAAATATT ATCTTACTTA AGAGGAGAGA GAAGCCTTGA TGAGGCAGTT GAAATTTTAA AGAGAGATAC AAGGCGATAT GCCAAACGCC AGATGACGTG GTTTAGGAAA ATTGAAAATG TTTACTGGAT AAACAAAGAT GAGTTTGACA GTGATGAGAA AATAATAAAA AATCTTAAAT ATTATCTTGC AACGTTTGGT ATTTTCTTGT AG
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Protein sequence | MDNVLVIIGP TASGKTKLAI EIAKRANGEI ISADSMQIYK YMDIGTAKPD EEEKEGIKHY LIDEVTPDEE FSVARFKELA LKYIDEILSK GKLPIVAGGT GLYINSLIYN LEFSDTICDW ELRKKLEQEA KEKGNEYLHN KLKEIDPKAA EKIHMNNVKR VIRAIEVYTY TKKPISVHQE ESRKNPPRHN FILIGITMDR EKLYDRINKR VDLMLEKGLV KEVEKLVEMG YDKSTIAMQG LGYKEILSYL RGERSLDEAV EILKRDTRRY AKRQMTWFRK IENVYWINKD EFDSDEKIIK NLKYYLATFG IFL
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