Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0761 |
Symbol | rnhB |
ID | 4810379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 926763 |
End bp | 927533 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640106178 |
Product | ribonuclease HII |
Protein accession | YP_001037189 |
Protein GI | 125973279 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0868001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAATA TGACTGTCAA ACAAATTGAG AAGTCCGTGG AAGGTTTGGA CCTGGATAAG GCTTTGGAAA AGCTTTATTG CCTTAAGGCT GAGTTTGGAG ACAGGGTTGA CAAAATCATA GAAAAGTATG AAAAGAAAAA ACTTAAATAT GAAAAAGAAC TGAATAGATA CCTGGAAATG TGCATATATG AAAAAGAGGC TTATCAGAGA GGCTACAAAT TGATTGCCGG GATTGATGAG GCGGGGCGCG GCCCACTTGC AGGTCCCGTT GTAGCTGCTG CGGTTATCCT TCCCCAGGAT GTTTTCATAG AAGGCCTTAA TGATTCAAAA AAGCTAACTG AGAATCAAAG GGAAAAGCTT TTTGACGTAA TTAATGATAA AGCGATCGGA GTGGGCATAG GGATTGTGGA TGAAAAGCAA ATTGATGAAA TAAATATTCT GAATGCCACG AAAAAAGCAA TGAAACTGGC TGTTGGCAAT CTAAAGCCTG TCCCGGACAT TCTTTTTATT GATTCTTTAA AACTTGACGA TATAAATATT GAACAAAATT CCATAGTAAA AGGCGATGCA AAAAGCGTGT CCATTGCGGC GGCGTCAATT ATAGCAAAGG TTACAAGGGA CCGTATACTA AGAGAAATGG ATAAAAAATA CCCAATGTAT GGATTTGCCA GGCATAAAGG TTACGGTACC GGCGAACATA TAGAAGCTAT TAAGAAATAC GGTATTTGTC CGATACATAG AGTAAGCTTT ACAAAGAACT TCATAGTATA G
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Protein sequence | MGNMTVKQIE KSVEGLDLDK ALEKLYCLKA EFGDRVDKII EKYEKKKLKY EKELNRYLEM CIYEKEAYQR GYKLIAGIDE AGRGPLAGPV VAAAVILPQD VFIEGLNDSK KLTENQREKL FDVINDKAIG VGIGIVDEKQ IDEINILNAT KKAMKLAVGN LKPVPDILFI DSLKLDDINI EQNSIVKGDA KSVSIAAASI IAKVTRDRIL REMDKKYPMY GFARHKGYGT GEHIEAIKKY GICPIHRVSF TKNFIV
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