| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0743 |
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| Symbol | |
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| ID | 4810361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 905340 |
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| End bp | 906794 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640106160 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001037171 |
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| Protein GI | 125973261 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000192336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAA CACTTTACAT AAAAAGTATT TTGCCAAGGC TCAAAAGAAC GTTTATAGGT
GACAAGAAAT TTTATAAAAC TGTACTGGCA CTTGTCATAC CGATTATAAT TCAAAACTCC
ATTACCAATT TTGTAAATCT TCTGGACAAT ATAATGATCG GACAGGTGGG AACGGCTCAA
ATGTCCGGCG TGGCAATTGC CAACCAGCTT ATGTTTGTGT TCTATCTTGC GGTGTTTGGA
GGATTGGCCG GTGCCGGCAT TTTTGCTGCG CAGTTCTTTG GAGCGGGAGA TAATGAAGGA
CTTAGATATA CATTAAGATA TAAACTGTGG GCTTCTGCTG TGATATTGGC AGTTGCACTG
GCAGTATTTT TATCCGGAGG AGATTGGTTG ATTTCTCTGT TCCTCAAAGG AGAAGGAGAT
CCTTCGGAAG CGGCAGCAAT ACTGGAGTAC GGACGTGTCT ATCTTAGAAT AATGCTTTGG
GGGCTTTTGC CTTTTATATT GTCACAGGTA TATGGAAGTA CCCTCAGAGA GATCGGCGAT
ACAATGGTAC CAATGGTAGC AAGTGTAGCT GCTGTGTTAA CAAACCTGTG TTTTAACTGG
GTATTGATAT TCGGTAAACT GGGTTTTCCT GAAATGGGAG TTGCAGGTGC TGCCATTGCA
ACGGTTATAT CCCGATATGT GGAACTGGTG ATCATAGCTG TGTATACCCA TATGAATACT
GCACGGTTTG GGTTCGTGGC TGGGGTTTAC CGCTCCATGA GAGTTCCGAG AGGCCTTGCA
CTGACAATAT TCAACAAAGG CATGCCGTTG CTGGCTAATG AAGTTTTGTG GGCAGTCGGA
GTGTCAGCAT TGACGCAAAT ATTCTCTACG TACAATCTCA ACGTTGTTGG GGCTCTCAAT
ATAGCAAATA CGATAACAAA TTTGTTCAAT GTGGCATTCA TATCGATGGG GTCGGCGGTT
GCCGTCATGG TTGGACAGGC CCTTGGTGCG GGGGATATGC AACGGGCAAA AGAATATTCA
TGGAAGTTGA TTTTTTTCAG TGTATGCACC TGTATTATAA TAGGAGCTGT ACTTGTGGCC
GTAGCGCCTG TAATACCGCG TATATATAAT ACGACCGAAG ATGTGCGAAA ACTTTCCGCT
CATTTTATGA TAGTAAGTGC CTTTTATATG CCGTTTTTTG CCATATCACA CTGTGCTTAT
TTTACCATAC GTTCGGGAGG CAAGACGTTT ATCACTCTTG TTTTTGACAG TGCATATACA
TGGGGCGTGA TTGTTCCTGT GGCTTATTTG ATTGCAAAGT ATGCGGATTT TGATATTTAT
ACGGCCTATC CGGTTTGTTA TTTTCCTGAT GTCCTGAAGA GTGTGCTGGG ATTGTATATA
ATAAAGAAAG GCCGTTGGGC TCAGAATATC GTGGCAAACG GCACCGAGTC TGAAGGTGTG
CGCTGCTTTG GATAG
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| Protein sequence | MNKTLYIKSI LPRLKRTFIG DKKFYKTVLA LVIPIIIQNS ITNFVNLLDN IMIGQVGTAQ
MSGVAIANQL MFVFYLAVFG GLAGAGIFAA QFFGAGDNEG LRYTLRYKLW ASAVILAVAL
AVFLSGGDWL ISLFLKGEGD PSEAAAILEY GRVYLRIMLW GLLPFILSQV YGSTLREIGD
TMVPMVASVA AVLTNLCFNW VLIFGKLGFP EMGVAGAAIA TVISRYVELV IIAVYTHMNT
ARFGFVAGVY RSMRVPRGLA LTIFNKGMPL LANEVLWAVG VSALTQIFST YNLNVVGALN
IANTITNLFN VAFISMGSAV AVMVGQALGA GDMQRAKEYS WKLIFFSVCT CIIIGAVLVA
VAPVIPRIYN TTEDVRKLSA HFMIVSAFYM PFFAISHCAY FTIRSGGKTF ITLVFDSAYT
WGVIVPVAYL IAKYADFDIY TAYPVCYFPD VLKSVLGLYI IKKGRWAQNI VANGTESEGV
RCFG
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