Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0733 |
Symbol | |
ID | 4810351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 890454 |
End bp | 891110 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640106150 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_001037161 |
Protein GI | 125973251 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.145422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTAA GAGTTGGTGA AATCGTTACT TTAAAGCATT ATTCCGCTAA AAGAAGCAAT CGAGGGATAA TCAGTAATTC GTTTGACAAC AATGTTGTTA TCAAACCTGA AAGAGATTTT CTTATTTACA ACTTTTTTGA CAGTGACCCG GTTGTAATAG GATTTGAGAA TGATAATGTT GTAAACATCT GTGAAAGCAC TGTAAAACAT GTGGATTACA ATCAAAATAC TTTTACTCTT ACTATTAACC ATATTCAATC AATAACAAAC AAGAGGCTTA CGCAGAGGTT TCCTGTTTCC TTGTGTGCGT ATATTTTAAG TCGCAACACC AGAGTTTTCT CTTACATAAG AAATATCAGC CTAGACGGCT TGGCGTTGTG TTCAAGACAG GAATTTAAAA AAGGTGACAT ATTAACTATC AATACAAAAA TTGAAAATAT TGAACTTACT TTTGAGGCAC AGGTTGTTTG GAAAAGCATT AGTGAAATAG GTTTTGAGTA TGGACTTGTA TATTACATGC CTGAGGATGA ATTCAGTAAA ACTATTGAAA GATGTCTGGA GTTTTTAAAA ATGGACCAGG AACTTTCAAT AAGCCGTCTT AAGTACGAAT TTGAGCCATT AAGAAGGATA AGTCAAAGGA AAAGTATAAT GAACTGA
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Protein sequence | MKLRVGEIVT LKHYSAKRSN RGIISNSFDN NVVIKPERDF LIYNFFDSDP VVIGFENDNV VNICESTVKH VDYNQNTFTL TINHIQSITN KRLTQRFPVS LCAYILSRNT RVFSYIRNIS LDGLALCSRQ EFKKGDILTI NTKIENIELT FEAQVVWKSI SEIGFEYGLV YYMPEDEFSK TIERCLEFLK MDQELSISRL KYEFEPLRRI SQRKSIMN
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