| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0726 |
|---|
| Symbol | |
|---|
| ID | 4810344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 882024 |
|---|
| End bp | 883526 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640106143 |
|---|
| Product | putative aminopeptidase 1 |
|---|
| Protein accession | YP_001037154 |
|---|
| Protein GI | 125973244 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1362] Aspartyl aminopeptidase |
|---|
| TIGRFAM ID | [TIGR01492] Plasmodium falciparum CPW-WPC domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTATTG TGAAAGCATT TAGAGATATA ATAATAAATA TAAAGTTTTT GCAGGAGGGA
ATAAATATGT CAGACAATAA AACCGCGGGA CAAAAGTTGT GGGAAAACCT GTCCTACAAC
TGCCCCAATG TTTGGAACAA AATAGGTAAT GATGAAATAA AAAACACCTT TGCATTTTGC
GAAGAATACA AATCTTTTTT AGACAAATCC AAGACAGAGA GAGAGTTTGT GCGCGAAACT
AAAAAGCTGG CTGAAAGCAA AGGTTTTGTT TCAATAGACG ATGTAATAGA TTCCGGAAAA
CCGCTAAAAC CCGGAATGAA AGTCTACAGA GTATTCAAAA ACAAAATCGT GGCCCTTGCA
GTTATAGGCT CACAGCCGCC GGAAAAAGGT TTTAACCTTG TAGGAGCGCA TATAGACTCA
CCAAGAATTG ATCTTAAGCC AAACCCGATA TATGAGGCAA ATGAAATGGT ATTTCTGAAA
ACACATTATT ACGGAGGTAT AAAAAAGTAT CAATGGGTAA CCATACCGCT CTCCATGCAT
GGAGTGATCA TAAGAAAGGA TGGAAGCAGT GTCGAAATTG TAATCGGCGA AGATGAAAAT
GATACAGTGT TTACAATAAC CGATTTGCTT CCGCACCTTG CGGCAGAACA AATGCAGAAA
AAAATGAGCG AAGGAATTAC AGGAGAGAAT TTGAATATTC TTTTCGGTTC AATTCCCTAT
AACGATGAAA AAGTTAAGGA AAAGGTAAAA TTAAACATAC TCAAGCTGCT TAATGAAAAA
TACAATATAA CCGAAGAAGA TTTACTGTCC GCGGAATTGG AATTGGTTCC TTCTTTTAAG
GCAAAAGATG TGGGTTTGGA TAAAAGTATG GTCGGTGCCT ACGGACAGGA TGACAGAGTT
TGTGCTTACA CAGCTTTAAG AGCCGTCCTG GATTTGGATA ACGTCGACAA AACAGCTGTT
TGTGTACTTA CGGACAAAGA GGAAATAGGA AGCATGGGTA ATACCGGAGC CCAGTCAAGC
TTTCTTGAAA ACTTCATTGC CGATATATGC GCATTAAGCT CTGAAAAGTA CACGGACATA
ATTTTAAGAA GATGCCTGAG CAATTCCAAA ATGCTTTCAG CCGACGTCAA CGCAGCAATA
GATCCAACCT ATGAAGGAGT ATATGACAAA CTTAACTCTT CCTTCATCGG AAAAGGAATT
GTTCTTTTAA AATATACCGG TGCCCGTGGA AAATCGGGTG CAAGTGATGC CCACGCTGAA
TTTATGGGAG AAGTGAGAAA GCTGTTCAAT GAAAGAAAAA TATTCTGGCA AACCGCCGAA
CTGGGCAAAG TTGATCAAGG TGGAGGAGGC ACAATTGCCC AATTTGTAGC CAATATGGGA
ATGGACGTAA TAGACTGCGG AGTAGCTGTT CTCTCAATGC ATTCTCCGTT TGAAGTAACC
AGCAAAGTGG ATATTTATAT GGCATATAAG GCTTACAGGG AGTTCTTGAA GTATATCAAA
TAA
|
|---|
| Protein sequence | MFIVKAFRDI IINIKFLQEG INMSDNKTAG QKLWENLSYN CPNVWNKIGN DEIKNTFAFC
EEYKSFLDKS KTEREFVRET KKLAESKGFV SIDDVIDSGK PLKPGMKVYR VFKNKIVALA
VIGSQPPEKG FNLVGAHIDS PRIDLKPNPI YEANEMVFLK THYYGGIKKY QWVTIPLSMH
GVIIRKDGSS VEIVIGEDEN DTVFTITDLL PHLAAEQMQK KMSEGITGEN LNILFGSIPY
NDEKVKEKVK LNILKLLNEK YNITEEDLLS AELELVPSFK AKDVGLDKSM VGAYGQDDRV
CAYTALRAVL DLDNVDKTAV CVLTDKEEIG SMGNTGAQSS FLENFIADIC ALSSEKYTDI
ILRRCLSNSK MLSADVNAAI DPTYEGVYDK LNSSFIGKGI VLLKYTGARG KSGASDAHAE
FMGEVRKLFN ERKIFWQTAE LGKVDQGGGG TIAQFVANMG MDVIDCGVAV LSMHSPFEVT
SKVDIYMAYK AYREFLKYIK
|
|---|
| |