Gene Cthe_0719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0719 
Symbol 
ID4810337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp874096 
End bp874527 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content43% 
IMG OID640106136 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001037147 
Protein GI125973237 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0000523514 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTTAT CTACCAAAGG AAGGTATGGG TTAAAAGCCA TGCTTGATCT TGCCCTCCAC 
AACGGCGAGG GACCGGTTGC TTTAAAAAGT ATTGCCGAGC GCCAGAATTT GCCGGAAAAT 
TATTTGGAGC AACTTTTTGC AACTCTTAAA AAGGCTGGCC ATATTACAAG TGTTAGGGGT 
GCACAGGGAG GCTATTTGCT TTCCAAAGAC CCTGACAGTA TTACAATAGG CTCGATTTTA 
AGGTCACTGG AGGGTTCTCT CGCACCGGTT GATTGTGTTG TGGAAGACAG TTCTCCAAAA 
TGTGACCGTT TTGACAACTG TGTTACGAAA ATAGTGTGGG AAAAAATAAG AGACAGCGTC 
AATGAAGCTG TAGATTCCAT TACTTTGGGG GATCTCGTAA AAGAATCCAA CAAAAATTCC 
GCACTTTCTT AA
 
Protein sequence
MWLSTKGRYG LKAMLDLALH NGEGPVALKS IAERQNLPEN YLEQLFATLK KAGHITSVRG 
AQGGYLLSKD PDSITIGSIL RSLEGSLAPV DCVVEDSSPK CDRFDNCVTK IVWEKIRDSV 
NEAVDSITLG DLVKESNKNS ALS