Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0716 |
Symbol | |
ID | 4810334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 872069 |
End bp | 872479 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640106133 |
Product | nucleoside diphosphate kinase |
Protein accession | YP_001037144 |
Protein GI | 125973234 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0105] Nucleoside diphosphate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000381443 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGGA CACTTGTTAT ATTAAAGCCT GATTCTGTAA AAAGGAAGCT TGTCGGTGAA ATTATATCCC GTTTTGAAAA AAGAAATTTC ACAATCCTTC ACTTGAAAAT GATGAATATT GACAGGGAAT TGGCCTGCGA ACATTATTCC CATGTAAAGG ATAAACCTTT TTTCAACGAT ATGATTGATT ATATAACATC CGGGCCGGTT GTTGTAATGG TTCTTTCCGG ATACAGGGTA ATTGAGGCGG TAAGAAGTAT GGTCGGTGCG ACAAGCAATT TTGATTCCAA GCCCGGTACC ATCAGGGGTG ATTATGGATA TCACAGATTT GAAAATCTTA TCCATGCTTC AGATTCTTGT GAAAGTGCCG AAATAGAAAT AAAGAGGTTT TTCCCCGAAC TGGATTCGTA G
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Protein sequence | MERTLVILKP DSVKRKLVGE IISRFEKRNF TILHLKMMNI DRELACEHYS HVKDKPFFND MIDYITSGPV VVMVLSGYRV IEAVRSMVGA TSNFDSKPGT IRGDYGYHRF ENLIHASDSC ESAEIEIKRF FPELDS
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