| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0714 |
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| Symbol | |
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| ID | 4810332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 869041 |
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| End bp | 871125 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640106131 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein |
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| Protein accession | YP_001037142 |
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| Protein GI | 125973232 |
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| COG category | [I] Lipid transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1
[COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
[TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000369991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGATAA TAGTTGCTAA ATCAGCCGGT TTTTGTTTCG GGGTAAGTAA CGCAGTTAAA
ACCGTCAATA ATCTTCTGGA AAATCAAAAA GAGCCCATAT ACACATACGG TCCTATTATT
CACAATGCGC AAGTAGTAGA TCTTTTTACT TCCAAAGGTG TTAAAAAAAT TGATGATATT
GACGAAGCAG AGCCCAACGG TCATATTGTA ATCAGGGCTC ATGGTGTTAC ACCGGACATT
TATAAAAAAA TTTCAGACAA GGGGTTGATT TTGGAAGATG CTACATGTCC ATACGTAAAA
AAAATTCACA ACCTTGTAAA GGAGAAAAGT GAGGAAGGCT ACAAGATAAT AATTGTAGGC
GACAGGAATC ATCCTGAAGT TATAGGGATA AATGGATGGT GTAACAACCA GGCATATATA
GTTGACAGTG TTGACGATGT AGAAAAATTT CCCACAAGCG ACGAAAAAGT TTGCGTAGTT
GCACAAACAA CGATAACAAA CGAAAAGTGG CTCGAGGTAA ACACGGCATT AAAAAAGAAA
TTCAAAAATA TTTTAAAATT TGATACAATA TGTAGTGCAA CCAGCAGAAG ACAAAACGAA
GCAGAAGAAA TAGCAAAAAA TGTTGATATG ATGATTATTA TCGGGGGAAA AAACAGTTCA
AACACCCAAA AGCTTTATGA CATATGTAAA AAGCATTGCA ATCTGACGTA TAAAATTGAG
ACTTCCGGTG ATTTGCCACC GGTAGACATA AAAAAAATAA AAAAAGTAGG TATTTCTGCC
GGAGCTTCTA CGCCGGACTG GGTAATTGAG GAGGTTATTA AAAAAATGAG TGAATTAAAC
AAACAAGGAA TGGTCGATAT TTTAGAAAAT GATGGTGAAA TAGATTTCGC CAATGCTTTT
GAGAATTCGT TTGTCAGAAT ACATGCAGGA GACACTGTAA AGGGAAAAAT AATTGGCTTT
AACAGCAATG AGGTTTTCGT TGACTTGGGT TACAAGGCTG ACGGCATAAT TCCTCTCGAA
GAGTACACTG ACGACCCTAA CTTCAATATT GAAAAGGAAG TAAAGATTGG AGAAGAAGTC
GAAGTTCTCG TTGAAATGGT CAATGACGGC GAAGGCAACG TAAGACTCTC AAAGAGGAAA
GTGGATGCCA TAAAATCTTG GGATGACATA GTTAAAGCCT ATGAAAACAA GACTCCTGTA
AACGCTTATG TTGTTGAAGT TGTAAAGGGG GGCGTAATTG CCAGCTACAA GGGCGTAAGA
ATATTCGTTC CTGCTTCACA GGTAAGCGAT AGATATGTAA AGGATTTGAA CGAATTCCTG
AAGAGAAGCA TAACTGTCAG AATTTTAGAG CTTAATGAAA AAAGACGTAA AGTGGTAGGT
TCCGCAAGGG TGATTATCGA AGAGGAAAAG GAAGCTCTTG CCAACAGGAC ATGGAACAGC
ATGGAAGTTG GAAAAGTATT CAAAGGTACT GTAAAAAGTC TTACTGATTT CGGTGCTTTT
GTTGATATAG GCGGAGTTGA CGGACTTATC CATATTTCAG AACTTTCATG GACAAGAGTC
AAACATCCGT CTGAAGTATT AAAAGTCGGA GATGAAGTTG AAGTAACAGT TTTGGAGTTT
GACAAAGAAA AGAAAAAAGT ATCTTTGGGA TATAGAAAGA TGGAAGACAA TCCATGGTAT
AAAATAGAAG AAAAATACAA AGTTGGTGAT GTTGTCAAGG TAACCGTTCT CCGTTTTGCT
CCCTTTGGTG CTTTTGTTGA GCTGGAAAAA GGTGTGGACG GATTGGTTCA CATATCCCAG
ATATCTTCAA AGAGACTGGC AAAAGTTGAA GATGCTCTTG AGATTGGTAT GAAAGTTGAC
GCAAAAATAA TTGAAGTAGA CGGCGAAAAC AAGAAAATCA GCCTTAGTAT TAAAGAGGTT
ATGCCGATAG ATCCTCCTTC ATCAAAGAGT GAATCCAAAG CAAAGGACGG ATCCGAAGCA
AAAGAAACCT CTGCCAATAC TGAAGAGGAA GCTGAACCGA CAGAGCATAG GGAAGACATG
AACGTAACAG TTGAAGATTT GGTATCAAAA ACAACGCAAT CTTAA
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| Protein sequence | MEIIVAKSAG FCFGVSNAVK TVNNLLENQK EPIYTYGPII HNAQVVDLFT SKGVKKIDDI
DEAEPNGHIV IRAHGVTPDI YKKISDKGLI LEDATCPYVK KIHNLVKEKS EEGYKIIIVG
DRNHPEVIGI NGWCNNQAYI VDSVDDVEKF PTSDEKVCVV AQTTITNEKW LEVNTALKKK
FKNILKFDTI CSATSRRQNE AEEIAKNVDM MIIIGGKNSS NTQKLYDICK KHCNLTYKIE
TSGDLPPVDI KKIKKVGISA GASTPDWVIE EVIKKMSELN KQGMVDILEN DGEIDFANAF
ENSFVRIHAG DTVKGKIIGF NSNEVFVDLG YKADGIIPLE EYTDDPNFNI EKEVKIGEEV
EVLVEMVNDG EGNVRLSKRK VDAIKSWDDI VKAYENKTPV NAYVVEVVKG GVIASYKGVR
IFVPASQVSD RYVKDLNEFL KRSITVRILE LNEKRRKVVG SARVIIEEEK EALANRTWNS
MEVGKVFKGT VKSLTDFGAF VDIGGVDGLI HISELSWTRV KHPSEVLKVG DEVEVTVLEF
DKEKKKVSLG YRKMEDNPWY KIEEKYKVGD VVKVTVLRFA PFGAFVELEK GVDGLVHISQ
ISSKRLAKVE DALEIGMKVD AKIIEVDGEN KKISLSIKEV MPIDPPSSKS ESKAKDGSEA
KETSANTEEE AEPTEHREDM NVTVEDLVSK TTQS
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