| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0694 |
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| Symbol | |
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| ID | 4810312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 852466 |
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| End bp | 853293 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640106111 |
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| Product | spermidine synthase |
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| Protein accession | YP_001037122 |
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| Protein GI | 125973212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.251821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTTT GGTTTACAGA GTATCAGACC CCTACATTGG GAATCACTTG CAAGACAAAA
AAGACTTTGC ACAGTGAAAA AACAGAGTAT CAGGAACTGG CAGTTATAGA AACGGAACAG
TTTGGCAGAA TGCTCCTTTT AGACGGAATA ATTCAGACTA CGGTTGCGGA CGAATTTGTC
TATCATGAAA TGATAGCCCA TGTTCCGCTG TTTACTCATA AAAATCCGAA AAAAGCGCTG
GTTGTCGGAG GTGGAGACGG AGGCTCAATA AGAGAAATAG TAAAGCATCC ATCCATTGAA
AAGGCAGTTT TATGCGAAAT AGACAGGCGT GTTATTGAGG TGTCGAAAGA GTATCTTCCG
GAAATCAGCT GCGCTTTGGA TAATGAAAAA GTTGAGGTAG TTGTAGGCGA CGGTATCAAA
TATGTAAAAG AACATAAAAA TGAATTTGAT GTTATAATAA TTGATTCCAC AGACCCGATA
GGACCTGCTG AAGGCCTGTT TGCCATTGAT TTTTACAGGG CTGTATACGA TTGTTTGAAG
GAAGACGGTA TATTTGTTGC ACAAACCGAA TCTCCTTTCA TCGATAAAGA GCTTATAACA
AGGATAATTA GAGATGTGAA ATCATTGTTC CCGATAACAA GGCTTTACAC ATGTGCAATT
CCTACATATC CTACAGGATA TTGGTGCTTT ACCATGGGAT CAAAGAAGTA TGATCCTTTA
GAAACCGACA TAGACTCCAT ACCGGATATC GATACGAAAT ATTACTGTCC GCAGATTCAC
AGAGCTGCAT TCATACTGCC GAAGTTTGCA AAAGAATTAA TAAAATAA
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| Protein sequence | MELWFTEYQT PTLGITCKTK KTLHSEKTEY QELAVIETEQ FGRMLLLDGI IQTTVADEFV
YHEMIAHVPL FTHKNPKKAL VVGGGDGGSI REIVKHPSIE KAVLCEIDRR VIEVSKEYLP
EISCALDNEK VEVVVGDGIK YVKEHKNEFD VIIIDSTDPI GPAEGLFAID FYRAVYDCLK
EDGIFVAQTE SPFIDKELIT RIIRDVKSLF PITRLYTCAI PTYPTGYWCF TMGSKKYDPL
ETDIDSIPDI DTKYYCPQIH RAAFILPKFA KELIK
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