Gene Cthe_0685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0685 
Symbol 
ID4810303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp844877 
End bp845548 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content38% 
IMG OID640106102 
Productpeptidase M50 
Protein accessionYP_001037113 
Protein GI125973203 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTAC AGCAATTTGG TGACAATCCG GAATTAATAA TTTACTGGTT TATGGTTTTT 
GCCTTTTCCA TATCAGTCCA TGAGTCGGCT CATGCTTACG CAGCCTATCT TTTGGGGGAT 
CCGACGGCTA AAGAGCAGGG AAGAATTACA ATTGACCCAT TAAAGCACCT TGATTTGTTT 
GGGACATTGA TGATGTTAAT CAGCTTTATA GGATGGGCAA AACCTGTGCC TATAAATCCG 
TCCAATTTTA AAAACAAAAA AGCAGGCACC ATTTTGGTAA GTCTGGCAGG TCCGCTTTCC 
AATTTGATTT TGGCGGTGCT TTTTGCCGTT CCTTTTGCTT ATGTGACTTT AAAATATTAT 
CCTTTGGAAA ATAATCCGCT AAATCCCGCG GTAATTGTTT ATAACTTTGC CCTCTATGGC 
TTTGTTATGA ATATATCGCT TGCGGTGTTT AATTTTCTTC CGCTGCCGCC TCTTGACGGT 
TCAAAAATAT TTACGGCAGT TTTGCCCTCA AAATATTACT TTAAGATTAT GCAATATCAC 
AATGTAACTT TCATTATACT AATATTACTG TTGTATACCG GGTGGCTGAA CAAAATAATA 
ACTCCGGTAA TTGGCGGAGT GCAAAGTGCC ATTTTATCTG TAATTGTACC CATAATAAAA 
CTCATTGTAT AA
 
Protein sequence
MLLQQFGDNP ELIIYWFMVF AFSISVHESA HAYAAYLLGD PTAKEQGRIT IDPLKHLDLF 
GTLMMLISFI GWAKPVPINP SNFKNKKAGT ILVSLAGPLS NLILAVLFAV PFAYVTLKYY 
PLENNPLNPA VIVYNFALYG FVMNISLAVF NFLPLPPLDG SKIFTAVLPS KYYFKIMQYH 
NVTFIILILL LYTGWLNKII TPVIGGVQSA ILSVIVPIIK LIV