| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0645 |
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| Symbol | |
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| ID | 4808174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 795913 |
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| End bp | 798327 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640106059 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_001037073 |
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| Protein GI | 125973163 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.474097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGA AAGATTTTTT GGATTTTCTA AATCAAAATA TACTGATTCT TGACGGTGCT
ACAGGTACCG AGCTTCAAAA AAGAGGGATG CCCGGCGGGG TATGCCCTGA GATGTGGGTA
ATTGAAAATC CGGATGTGAT TATGGATATA CAAAAAGATT ACATAAATGC TGGGTCAAAT
GCTGTATATA CCTGTACCTT TGGAGGCAAT AGAATAAAGC TTTCCGAGTT TGGATTGGGT
GACAAGGTGG TTGAAATAAA CAAAAAACTG GCACAGCTTT CAAGAAAGGC CGCAGGAGAA
AAGGGATTGG TTGCGGGGGA TCTTGCACCT ACCGGAAGAT TCGTAAGACC CTTTGGGGAC
ATGCCCTTTG AAGAGGCGGT GGATGTTTAC AAGGAACAGG TAAAGGGCCT TTTGGAAGGC
GGTGTGGACT TTTTTGTAAT AGAAACCATG ATGGACATAC AGGAAGCAAG AGCGGCTCTG
CTGGCCGTAA AAGAAAGCTG TGACCTTCCT GTGTGCGTCA GCATGACCTT TGACGAAAGC
GGAAGAACTC TTACGGGAAC CGATTCGGTG TCGGCTCTGA TTATTCTGCA AAGCCTTGGA
GCGGATGTTG TAGGATGCAA CTGTTCCACA GGACCGCAAG ACATGATAAA AATAATCAGA
GAAATGAAAC CCTATGCAAA AGTGCCTCTG CTTGCAAAGC CAAACGCAGG ACTTCCCAAA
TTGATTGACG GAAAAACCCG GTTTGATATG GAACCTGAAG AATTCGGAAG TTACATAAAA
GAGTTTGTGG AAGCGGGAGT AAATCTTTTG GGAGGCTGCT GCGGTACATC TCCTGTGTAC
ATTGAGCAGA TTCGAAAAAA TATTGAGGGA TTAAAACCCA TACCTCCACA GCCAAAAGAA
ATTTGTGCCG TTGCTTCCGC CAGAAAAACG GTTTTCGTTG ATGCCAATGA ACCCGTTGTG
GTGGTGGGAG AGAGGATTAA TCCAACAGGG AAAAAGAAAC TGCAGGAGGA ATTGCGTCAG
GGCATGACAT CCCTGGTAAG GCAATTCGCA GTAGAACAGG TGGAAAAAGG TGCGGACATA
CTGGACGTTA ATGTGGGCAT GCCAGGAATA GATGAAAAGG AGACAATGGT AAAAGTAGTA
GAACTTTTGT CTTCCATCAC TGACGCTCCG CTTTGTCTGG ATTCTTCTTC TCCGGAGGTT
CTTGAGGCTG CTCTTAGGAT TTATCCCGGC CGGGCCCTTA TAAATTCCAT TTCGGCGGAA
AAGGTAAAAA TAGAGAAGCT TCTTCCGATT GCTGCAAAAT ACGGAGCGGC GTTTATACTT
CTTCCATTGG GTGATGCAGG AGTGCCCAAG AGTGCCGGAG AAAGGTGTAA AATAGTTGAA
GAAGTTTTTA ATGAAGCGTC AAAATGGGGA TATACAAAGA AAGATGTCAT AGTGGACGGA
CTTGTTATGA CTGTCTCGGC CGACCAGGAG GCGGCTGTTG AAACATTAAA GGTCATAGAA
TGGTGTACCC AAAGTTTTGG CTGCGGAACA ATAGTGGGAC TTTCGAACGT GTCTTTCGGA
ATGCCTGAGA GAGCTTGGAT AAACTCGGCT TTTCTCGCTA TGGCAATCGG ATACGGACTT
ACCATGGCCA TATTAAATCC GTCCAGCGAT ACTCTTATGA GCATAAAGAT GGCTTCGGAT
GTATTGAAGG TCAAGGATAG GAACAGTAAA AAATATATTG AGCATTTTGC GGCTTTAAAG
AGTGACAAGC CCCAGGTTGT TGAAAAAAAG GATACGGCAA GCCCTGTTGA AAAAGTGTAT
GATGCCGTGG TAAAGGGTGA CAGGGAGAAT ATTCGAAAAT ATATTGATGA TGCGTTAAAA
GACGGAACAG AGCCTTCGAT AATTGTTGAT AAATATCTTA TTCCCGCCAT AACTCATGTG
GGCGACCTTT ACGACAGAAA AGAGTATTTT TTGCCTCAGC TTATACAAAG TGCGGAGACG
ATGAAAGAAG CCTTCGGCAT TTTAGAACCT CTTCTTAAGA AAGAACCAGT GGACGAAAAA
GGTAACAAGG TAAAAGTGAT ACTTGCCACC GTAAAAGGAG ATATCCACGA CATCGGAAAA
AATATAGTTG GATTGATGCT TAGAAACTAT GGATTTGAAG TATACGATCT TGGAAAGGAT
GTAAGCGCCG AAGAAATAGT GAAAAAAGCA AAAGAGACAA ATGCGCCGAT TATAGGTCTT
TCCGCTCTTA TGACAACAAC AATGCTCGAA ATGAGGGAAG TTGTAAGCTT AGTCAGACAA
GAGGGGCTTA ACGCTAAAAT AATGATTGGC GGAGCGGTGG TAAATGCTGA TTATGCAAAA
GAAATCGGTG CAGACGGATA TTCCGAGGAT GCTTACGGTG CGGTGAAACT TGCGTCAAAA
CTTGCAGGAA TTTAA
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| Protein sequence | MNKKDFLDFL NQNILILDGA TGTELQKRGM PGGVCPEMWV IENPDVIMDI QKDYINAGSN
AVYTCTFGGN RIKLSEFGLG DKVVEINKKL AQLSRKAAGE KGLVAGDLAP TGRFVRPFGD
MPFEEAVDVY KEQVKGLLEG GVDFFVIETM MDIQEARAAL LAVKESCDLP VCVSMTFDES
GRTLTGTDSV SALIILQSLG ADVVGCNCST GPQDMIKIIR EMKPYAKVPL LAKPNAGLPK
LIDGKTRFDM EPEEFGSYIK EFVEAGVNLL GGCCGTSPVY IEQIRKNIEG LKPIPPQPKE
ICAVASARKT VFVDANEPVV VVGERINPTG KKKLQEELRQ GMTSLVRQFA VEQVEKGADI
LDVNVGMPGI DEKETMVKVV ELLSSITDAP LCLDSSSPEV LEAALRIYPG RALINSISAE
KVKIEKLLPI AAKYGAAFIL LPLGDAGVPK SAGERCKIVE EVFNEASKWG YTKKDVIVDG
LVMTVSADQE AAVETLKVIE WCTQSFGCGT IVGLSNVSFG MPERAWINSA FLAMAIGYGL
TMAILNPSSD TLMSIKMASD VLKVKDRNSK KYIEHFAALK SDKPQVVEKK DTASPVEKVY
DAVVKGDREN IRKYIDDALK DGTEPSIIVD KYLIPAITHV GDLYDRKEYF LPQLIQSAET
MKEAFGILEP LLKKEPVDEK GNKVKVILAT VKGDIHDIGK NIVGLMLRNY GFEVYDLGKD
VSAEEIVKKA KETNAPIIGL SALMTTTMLE MREVVSLVRQ EGLNAKIMIG GAVVNADYAK
EIGADGYSED AYGAVKLASK LAGI
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