| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0605 |
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| Symbol | |
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| ID | 4808207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 740565 |
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| End bp | 741677 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640106019 |
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| Product | PgdS peptidase. cysteine peptidase. MEROPS family C40 |
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| Protein accession | YP_001037033 |
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| Protein GI | 125973123 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000243263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAGT TTAACAAGGT TTTCATGTAC ATAACTGCTT CGGCTTTGTC TGTTTCTTTA
TGGACATGTA CTTCTTTTGC ACAGCAGAAC AAAACGGGAG TAACTACTGC AAGCATGCTT
AATATGCGTG AAAATCCCAG CACTTCGACG AAAATCATAG ACCAAATTCC AAATGGAACC
AAGGTTGATA TAATAGAAAC TTCAAACGGT TGGTATAAAA TTTCGTACAA TGGCAAGACA
GGATGGGTTT ACGGTTCTTA TGTTAAAGTA ACGGAGACAC CAAAACTGAC TGTGACGGAT
GAAACGATAT TGGCGACTTT GAATAAAGGT TCTACCGGTA ATTCTTCAAC CAATTCTTCT
ACAAATAATT CTGCTGTCAA CAATTCTTCC AGTCAAGTGG TCGATGAAAC CATTCAAAAA
CCTGCTCAAA ATGCTGCATC CGGAGAAAAC ACTGAAAATA CCGTTGTAAA AACAGGAATT
GTGAAAGCTT CGGCTCTGAA TGTAAGGCAG GGACCGGGTA CTTCCTATAG TATTATTAAT
CAGCTTTCAA ACGGCGCAAA GGTAAATATA ATAAAAGAAG AGTCCGGCTG GTATCAAATC
AAGCTGGCAA ACGGTTCTAC AGGTTGGGTT TCAGGTACAT ATGTGAATGT CAATACTACC
ATTGCTTCAA GAGGAGGACT TTCTGAAAAT TCAGCTCCGG CAGCTTCAAA TAACAGCGAT
GTGTCCGGTG TGAGACAGCA GGTTGTTGAA TATGCCAAGA AATTTTTAGG AGTCAAATAT
GTATATGGAG GAAATTCGCC TTCTCAGGGA TTTGACTGTT CCGGTTTTGT AAAATATGTG
TTCAGCAATT TTGGTATTAA TCTTGAAAGG GTTGCCGCAA GTCAGGCAAA GCAGGGTACA
TGGGTTTCCA AGGATCAATT GCTGCCCGGC GACCTCGTAT TTTTCGATAC CGACGGAGGA
CATAATTATA TTAACCATTC CGGCATATAC ATAGGAGATG GAAAGTTTAT TCATGCATCA
TCGGGAAGCG GCAAGAAGAG TGTTGTTATA AGTGACCTTA CGAGCGGGTT TTATGCCAAC
ACTTATATGA CCGCGAGAAG AGTTTTAAAT TAA
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| Protein sequence | MLKFNKVFMY ITASALSVSL WTCTSFAQQN KTGVTTASML NMRENPSTST KIIDQIPNGT
KVDIIETSNG WYKISYNGKT GWVYGSYVKV TETPKLTVTD ETILATLNKG STGNSSTNSS
TNNSAVNNSS SQVVDETIQK PAQNAASGEN TENTVVKTGI VKASALNVRQ GPGTSYSIIN
QLSNGAKVNI IKEESGWYQI KLANGSTGWV SGTYVNVNTT IASRGGLSEN SAPAASNNSD
VSGVRQQVVE YAKKFLGVKY VYGGNSPSQG FDCSGFVKYV FSNFGINLER VAASQAKQGT
WVSKDQLLPG DLVFFDTDGG HNYINHSGIY IGDGKFIHAS SGSGKKSVVI SDLTSGFYAN
TYMTARRVLN
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