| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0602 |
|---|
| Symbol | |
|---|
| ID | 4808204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 737976 |
|---|
| End bp | 739274 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640106016 |
|---|
| Product | thiamine biosynthesis protein ThiC |
|---|
| Protein accession | YP_001037030 |
|---|
| Protein GI | 125973120 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
|---|
| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATACAA CTCAGATGGA TGCAGCCAAA AAAGGAATAA TAACCGATGA AATGAGAATA
GTGGCCGAAA AAGAGGGTGT GCATGTTGAG AAGTTGCGAG AGCTTGTTGC ATCAGGCAAA
GTGGTCATAC CGGCCAATAA AAACCACAAA AAACTTGAGC CTCAAGGAAT AGGAGAAGGT
TTAAGAACAA AAATCAATGT TAATATCGGA ATATCGAAGG ACTGCTGCAA TTTTGAGATG
GAGTTGGAAA AGGCAAAAAA GGCAATTGAG CTTAAAGCCG AGGCGATAAT GGATTTAAGT
TCCTACGGAA AGACAAGGGA GTTTAGGCGA AAGCTTGTGG AAATGTCTCC TGTAATGATA
GGTACTGTGC CGGTATATGA CGCGGTGGGG TTTTATGAAA AAGACCTTAA AGATATTAGC
GCTGAAGAAT TTTTCGAAGT GGTGGAAAAG CATGCCGAAG ACGGTGTGGA CTTTATGACA
ATTCATGCCG GCATAAACCG GGAGACCGCA AAGAGATTTA AGGAAAACGG CAGACTTACC
AATATCGTAT CCAGAGGGGG TTCTTTGATA TTTGCATGGA TGGAGCTTAC GGGAAATGAA
AATCCCTTCT ATGAGCAGTA TGACAGGCTG CTTCAAATAT TTGAAAAGTA TGATGTCACC
ATAAGTCTTG GGGATGCATT AAGGCCGGGA AGCATAAATG ATTCCACCGA TGCGTCGCAA
ATACAGGAAC TTATTGTTTT GGGAGAGCTT ACCAAAAGAG CATGGGAGAA GAACGTACAG
GTTATGATTG AAGGACCGGG GCATATGGCC ATAAATGAAA TTGCCCCAAA CATGGTTTTG
GAAAAAAAGC TTTGTCACGG TGCACCTTTC TATGTTTTAG GACCGATTGT CACGGACATT
GCACCGGGAT ACGACCACAT AACCAGTGCT ATTGGAGGAG CCATTGCGGC TGCAAACGGT
GCGGATTTTC TGTGTTATGT CACTCCCGCG GAGCATTTGA GGCTTCCTGA CATAGATGAC
ATGAAAGAAG GAATTATAGC AGCCAGAATT GCGGCCCATG CCGCAGATAT AGCGAAAGGA
ATCAAAGGAG CAAGGGAATG GGACTACCAA ATGAGCGAGG CAAGGAGAAA CCTTGACTGG
AACAGGATGT TTGAGCTTGC AATAGACAGG GAAAAAGCGG AAAGATACCG CAAAAGCTCG
ATGCCTGAAG ATGAAGACAC CTGTACCATG TGCGGCAGAA TGTGCGCAGT CAAAAACACA
AACAAAGCCC TTAAGGGTGA AAAAATAAAT ATTCTTTAA
|
|---|
| Protein sequence | MYTTQMDAAK KGIITDEMRI VAEKEGVHVE KLRELVASGK VVIPANKNHK KLEPQGIGEG
LRTKINVNIG ISKDCCNFEM ELEKAKKAIE LKAEAIMDLS SYGKTREFRR KLVEMSPVMI
GTVPVYDAVG FYEKDLKDIS AEEFFEVVEK HAEDGVDFMT IHAGINRETA KRFKENGRLT
NIVSRGGSLI FAWMELTGNE NPFYEQYDRL LQIFEKYDVT ISLGDALRPG SINDSTDASQ
IQELIVLGEL TKRAWEKNVQ VMIEGPGHMA INEIAPNMVL EKKLCHGAPF YVLGPIVTDI
APGYDHITSA IGGAIAAANG ADFLCYVTPA EHLRLPDIDD MKEGIIAARI AAHAADIAKG
IKGAREWDYQ MSEARRNLDW NRMFELAIDR EKAERYRKSS MPEDEDTCTM CGRMCAVKNT
NKALKGEKIN IL
|
|---|
| |