Gene Cthe_0596 details

Gene Information

• Locus tag: Cthe_0596
• Symbol: engB
• ID: 4808198
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 733087
• End bp: 733710
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640106010
• Product: ribosome biogenesis GTP-binding protein YsxC
• Protein accession: YP_001037024
• Protein GI: 125973114
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.502995
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTGA AACTGAATCT GAATTTAAAC AATGCGAGAT TTGAGATTAC GGCTGTAAGA 
CCGGAACAGT ATCCGAAAAA TGATTTACCG GAGATTACAT TTGTGGGAAG ATCCAATGTG 
GGAAAATCAT CACTCATAAA TACAATGCTG AACAGAAAAA ATCTTGCAAA AGTTGCTGCA 
ACACCGGGGA GAACCAGGGT TATAAATTTT TACAACATAG ATGACAAACT TTATTTTGTC 
GATCTTCCGG GCTATGGCTT TGCAAAGGTG CCAAAAACTA TGAAGACCGG CTGGAAAGAT 
ATAATTGAAA CTTATCTTAT AGAAAGAAAA CAGCTGAAGA AAGTAATCAT GCTGGTGGAT 
ATCAGGCATT CGCCGACTTC TGACGACGTG CTTATGCATG AATGGCTGAA AGCTATGAGA 
AAATCCTATG TGGTTGTAGC TACCAAACTT GACAAAATAC CACGCACAAA AATAAAAGAG 
AGGATTTCGG ATATACGCAG CATCCTGAAG CTTGAGGATG ATGTAAAAAT AATTCCCTTT 
TCTTCAGAAA CAAGACAGGG AAGAGATGAG TTGTGGGATG AAATTTTGGA TGAATCATAT 
TTTGTTGAAT CATATTTTTC ATGA 

 

Protein sequence

MKLKLNLNLN NARFEITAVR PEQYPKNDLP EITFVGRSNV GKSSLINTML NRKNLAKVAA 
TPGRTRVINF YNIDDKLYFV DLPGYGFAKV PKTMKTGWKD IIETYLIERK QLKKVIMLVD 
IRHSPTSDDV LMHEWLKAMR KSYVVVATKL DKIPRTKIKE RISDIRSILK LEDDVKIIPF 
SSETRQGRDE LWDEILDESY FVESYFS