Gene Cthe_0579 details

Gene Information

• Locus tag: Cthe_0579
• ID: 4808254
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 708844
• End bp: 709365
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640105993
• Product: nitroreductase
• Protein accession: YP_001037008
• Protein GI: 125973098
• COG category: [C] Energy production and conversion
• COG ID: [COG0778] Nitroreductase

Plasmid Coverage information

• Num covering plasmid clones: 50
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGTATG ACCTGCTGAA ATCCAGAAGA AGCATCAGAA AATTTCAAAA CAAAGAAGTG 
GAGAAGGAAA AAATAGATAT AATCTTAAAA AGCGCTTTGA TGGCGCCTTC GTCCCGTTCG 
AGAAGACCGT GGGAGTTTAT TGCGGTTACT GACAAAGAAA AACTTGAAAA GCTTTCAAAG 
ATCAGAGAAC ACAGTTCAGA TTTTTTGGCA GGTGCTCCAT TGGGCATCGT TGTTGTGGCA 
AATCCGAAAA CTTGCGATGT ATGGATAGAG GATTCATCAA TAGCTGCGAT TATAATTCAG 
CTTTCCGCTC AGTCTCTCGG GCTCGGGTCA TGCTGGATAC AGGTCAGGGA AAGATTTGGA 
CGTAACAATA AGAGGGCAGG GGACATTGTA AAAGAGATTT TGCAAATACC CGATGAATAT 
GAAGTGGAAT GCATAATAGC CGTGGGTTAT TCCGCAGAAG AGAAGAAGCC GTATAATGTA 
GATGAATTGC CTTATAACAA GCTTCATTTT GAAAGCTTTT AA 

 

Protein sequence

MLYDLLKSRR SIRKFQNKEV EKEKIDIILK SALMAPSSRS RRPWEFIAVT DKEKLEKLSK 
IREHSSDFLA GAPLGIVVVA NPKTCDVWIE DSSIAAIIIQ LSAQSLGLGS CWIQVRERFG 
RNNKRAGDIV KEILQIPDEY EVECIIAVGY SAEEKKPYNV DELPYNKLHF ESF