| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0570 |
|---|
| Symbol | |
|---|
| ID | 4808245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 697480 |
|---|
| End bp | 698163 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640105984 |
|---|
| Product | peptidase, membrane zinc metallopeptidase, putative |
|---|
| Protein accession | YP_001036999 |
|---|
| Protein GI | 125973089 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2738] Predicted Zn-dependent protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000147149 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGGTA TCGATCAATA TTATATAATT TTAGTTTTGC CCGCACTTAT TCTTTCAATA
TTTGCGCAGT TCAAGGTGAA AAGTACGTTC AATAAATACA GCCGTGTCAG AAATACAAGC
GGTATGACAG GAGCGGATGT GGCAAGACTG ATTCTTGACA GAAACGGACT TAGTGATGTC
AGGATTGAAA GAGTTGCAGG AGAACTTACG GACCATTATG ATCCCAGAAC AAGAGTGATA
AGGCTTTCCC AGTCGGTTTA CGGCAGCAAT TCCGTGGCGG CAATCGGAGT TGCGGCCCAC
GAAACAGGCC ATGCCATCCA GCACAGTGAA CAATATGGCC CCCTGGTTTT AAAACGCAAT
TTGGTTCCGG TGGCAAACAT AGGTTCATGT TTGGGATTCC CATTGGCGAT AGCCGGATTG
TTTTTTGGTT TGCCTTTTTT GGTTAATTTG GGAATAATAT TTTATTCTCT TGCAGTGGCA
TTCTACGTAA TTACTCTGCC TGTTGAATTT AATGCGAGCA GCAGGGCAAT ACGCACCCTT
GAAGATACCG GTGTGCTGAA TTATGATGAA ATTGACCCGG CAAAGAAAGT GTTGTCGGCT
GCTGCCTTGA CTTATGTCGC TGCTGCCGCT GTTGCAATCG GAAACCTTCT GCGTCTGATT
ATGCTTACGA AAAGAAGAGA TTGA
|
|---|
| Protein sequence | MYGIDQYYII LVLPALILSI FAQFKVKSTF NKYSRVRNTS GMTGADVARL ILDRNGLSDV
RIERVAGELT DHYDPRTRVI RLSQSVYGSN SVAAIGVAAH ETGHAIQHSE QYGPLVLKRN
LVPVANIGSC LGFPLAIAGL FFGLPFLVNL GIIFYSLAVA FYVITLPVEF NASSRAIRTL
EDTGVLNYDE IDPAKKVLSA AALTYVAAAA VAIGNLLRLI MLTKRRD
|
|---|
| |