| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0560 |
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| Symbol | |
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| ID | 4808235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 686740 |
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| End bp | 688515 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640105974 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001036989 |
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| Protein GI | 125973079 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCACA AAGTATTAAT ACTGGGAGCA GGGTATGCAG GTATTGAAGC TGCCTTGACG
CTCCACAAAA AGAAACGCAA AAAAGATGAT ATCGAAATAA CCATTATCGA CAAAAATCCT
TATCACACTC TTCTTACAGA ACTCCATGAA GTCGCGGGAA ACAGGATAAC CGAAGATGCC
GTCATAGTAC CGTTAAAAGA TATCTTTGCA TATACGGATG TAAAAATCGT TAAAGACGAA
ATAAAAAATA TTGATTTGGA GAATAACAAA CTTATATCCG ACACCAATGA GTACCAATAT
GACTACCTTA TTTTCGCGGT GGGAAGCGAA CCTAATTACT ATGGTATTCC GGGAATGGAA
GAATACGCTT TTCCTTTGTG GTCTTTCAAA GATGCCGTTG CAATTAGAGA GCATATAAAA
GACTGCTTTG ATAAAGCTTC CCGGACAACA GATCCGGAAA CAAGGAAGAC CCTTCTTACC
TTTGTTGTGG GAGGCGGAGG CTTTACCGGT GTTGAAACCA TCGGCGAAAT CGCTCACTGG
GTCAAATCTT TGTGCAGGGA ATACAATATA AAAAGAGAAG AAGTTGACTT AAAGCTTATC
GAGGCTTTAC CAAAGATACT AAGCAATCTG AAAGACAAAA ATATCAACAA GGCCATGAAG
TATCTTACAA ACACTTTGAA GGTTGATGTT CTGTTGAACA GCGCGATAAG CAAGCTCAAT
GAAGACAGTG TAGAGCTCAA AGACGGACGG AAAATACCTA CCAAAACCCT TATCTGGACT
GCCGGTGTAA GGGCATGCTG TCTTAATGAC AATCTTTCTC TTGAAAAAGG AAGAGCGTGT
AGGATAAAGG TGGATAAATA CGCCGCAACT CAATTTAAAA ATGTATATGC AGTGGGAGAT
GCCTCTTGTT TCGAGTACAA CGGACACACT CTCCCGGCGC TGGTTGAGGC GGCGCTGCAG
ACCGGAAAGG GAGCTGCATT AAACGTCCTC AATGATATCA GAGGCAAAGA AAGAGAGGAA
ATAAAGCCCA AGCTCCACGG CGTCATGGTT TCCGTCGGAA GTTTCTTTGC CGTTGCTGAG
ATTATGGGGG TTCTGCTTCC AAGGTTTTTG GCAATATTAA TGAAATACCT CGTAAATATA
CACTATTTGT TTGGAATAGG CGGTTTTGAG CTTGTATTTA AGTACATCAG GCACGAATTT
TTCCAAAAGA AACAGGATAA ATTCCTGCTG GAAAAGCACT ACTCCGTCAC CAGTCCTACT
TTCTGGCTTG TTCCATTGCG TCTCTTTTTA GGATACTCAT GGCTTATGGA AGGACTCAAC
AAATTAAAAG AAGGCTGGCT CAGCACTCCT ATGCTTGCCG GCATGGCTGT TGACGGTCAA
ACCAGCGCTT CCGTGACCGA AACCGGAGAA AAGGTGTTCA GAATTATATC ATCTCATACT
CCTTCGTGGT ATGCTTTTAT AGCCGAAAAA CTTGTAATTC CCAACGCCCT TTTCTTCCAG
TGGCTTATAG TGCTTGCAGA AATAGGCCTT GGTATTGCGT TTATTTCAGG AACATTTACA
TTTTTAGCAG GATTGGGTGC ATTGGCACTG AATATCAACT TCCTGCTGTC AACAGGACTG
TATGAGACCT CCTGGTGGTT CATCCCGGCT GCAATTTGTA TGCTCGCCGG TGCGGGAAGG
TCCTTTGGAG TGGATTATTA TCTGATTCCG TATCTCATGA GACAGTGGAG ATATTTCGTA
AGAAACCAAA AAATAAAGCT CTTCCTTTTC CGATAA
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| Protein sequence | MAHKVLILGA GYAGIEAALT LHKKKRKKDD IEITIIDKNP YHTLLTELHE VAGNRITEDA
VIVPLKDIFA YTDVKIVKDE IKNIDLENNK LISDTNEYQY DYLIFAVGSE PNYYGIPGME
EYAFPLWSFK DAVAIREHIK DCFDKASRTT DPETRKTLLT FVVGGGGFTG VETIGEIAHW
VKSLCREYNI KREEVDLKLI EALPKILSNL KDKNINKAMK YLTNTLKVDV LLNSAISKLN
EDSVELKDGR KIPTKTLIWT AGVRACCLND NLSLEKGRAC RIKVDKYAAT QFKNVYAVGD
ASCFEYNGHT LPALVEAALQ TGKGAALNVL NDIRGKEREE IKPKLHGVMV SVGSFFAVAE
IMGVLLPRFL AILMKYLVNI HYLFGIGGFE LVFKYIRHEF FQKKQDKFLL EKHYSVTSPT
FWLVPLRLFL GYSWLMEGLN KLKEGWLSTP MLAGMAVDGQ TSASVTETGE KVFRIISSHT
PSWYAFIAEK LVIPNALFFQ WLIVLAEIGL GIAFISGTFT FLAGLGALAL NINFLLSTGL
YETSWWFIPA AICMLAGAGR SFGVDYYLIP YLMRQWRYFV RNQKIKLFLF R
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