| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0512 |
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| Symbol | |
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| ID | 4808314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 625728 |
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| End bp | 627248 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640105927 |
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| Product | phage integrase |
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| Protein accession | YP_001036942 |
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| Protein GI | 125973032 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000591844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGCAG GACACTTGCG TGAGAAGAAC GGATACTACC ACATAATACT TAACTGGAAG
GACGGTGATG GTAAAAGACG GAGCAAATCA ATTAGCACGG GCCTGCCTGT AAAGGGCAAT
AAGAAAAAAG CCGAGGCTAT GTTATTGGAG GCTCGTAAGA CTTTTAAGCC GGAGGATATT
GCGTCAGGTA AGAACACTCC GTATCACGTC TTTTTAGACA GATGGCTAAA GGACAAGATG
AACGACTTTG ACGAAGAAAC TTACGCAGTA TACAGCCATA ACGCCAGAGT TTTTATCGGT
CCTTACTTTA AGAGCTTAAA TTTGCAGCTC CACGAGATAA GGACCTCAAC ACTGGAAGCC
TACTATAACC ATGAAAAGAC GAAAAACCAT GCGTCTAAAA AGACCATCTT GCAGATACAC
GAGATTATTA CATTATCGTT AAACTACGCA ATAGAGCTTG GCTGGATTGA GAGCAACCCA
GCAAAAGGTA TTAACCCTGC GACAGATGAG GTGTCGGTTT TATTCGTGGA CTTTTTATTG
GAGTGGTTGG AGATGATGCG GACCAGAGTC AGGGAGACCA CATACGCATC CTATAACAGT
GGCATCAGGC AGAGCATAAT CCCCTATTTT ATGGACAAAA AGCTGACACT GACCGATATT
GAGGAAAACC CCAAGTATTT GCAGGACTTT TATCAGCACG AATTAAGTAA GGGACTGTCG
CCTAATTCGG TGTTAAGACG TCATGCCAAC ATTCGCAAAG CCTTGCAGCA CGCTTTTCAT
CTGGGTTTAA TTAAATCTAA TCCAGCCGAC AGGATTGAGC GTCCTAAAAA GCAGGATTAC
ACTGCATCCT ACTACACCGA TGAGGAGCTT GCTAAACTTT TCAAGGCTGC AAAAGGTGAC
CCCTTGGAGT TACCCATAGT TTTAGCGGCT TACTATGGTC TGCGTAGGAG CGAGATAATA
GGGTTAAGGT GGGATGCGAT TGATTTTAAC CCAGATGACC CGAAAATAAC AATACAATTC
ACAGTGACAG AGGTCAACTT TGGAGACGGG CAAGGCAATG TTATTATAGA AAAGGAGGGA
ACCAAATCAA AAGCCAGTAA ACGCACGTTG CCGCTGGTCA AGCCAATCGC AGACTTACTG
TTGCAGAAGA AAAAAGATAT AGAGAATAAC AGGAGGTTAT GCGGTAGTTG CTACAATGAC
AAATACTTGG ACTTTGTTCA CGTTAATGAG ATAGGAGAGC GAATGAAACC AAACTATATA
TCACAGCATT TTGCACTTTT ACTGGAGAAA CATGGGTTAA AGAAAATCAG GTTTCATGAT
TTACGACACT CATGTGCGAG CCTGCTATAC GCAAACGGTG TAAGTCTCAA GCAAATACAG
GAGTGGTTGG GGCACAGCGA TATATCCACG ACAGCCAACA TATACACTCA TTTAGACTAT
AACAGCAAAA TTGCTACGGC AAATGCAATC CTGCCAGTTT TATTCGACCA GCAGGAATCA
ACTGATGAAT TAGAGAGATA A
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| Protein sequence | MIAGHLREKN GYYHIILNWK DGDGKRRSKS ISTGLPVKGN KKKAEAMLLE ARKTFKPEDI
ASGKNTPYHV FLDRWLKDKM NDFDEETYAV YSHNARVFIG PYFKSLNLQL HEIRTSTLEA
YYNHEKTKNH ASKKTILQIH EIITLSLNYA IELGWIESNP AKGINPATDE VSVLFVDFLL
EWLEMMRTRV RETTYASYNS GIRQSIIPYF MDKKLTLTDI EENPKYLQDF YQHELSKGLS
PNSVLRRHAN IRKALQHAFH LGLIKSNPAD RIERPKKQDY TASYYTDEEL AKLFKAAKGD
PLELPIVLAA YYGLRRSEII GLRWDAIDFN PDDPKITIQF TVTEVNFGDG QGNVIIEKEG
TKSKASKRTL PLVKPIADLL LQKKKDIENN RRLCGSCYND KYLDFVHVNE IGERMKPNYI
SQHFALLLEK HGLKKIRFHD LRHSCASLLY ANGVSLKQIQ EWLGHSDIST TANIYTHLDY
NSKIATANAI LPVLFDQQES TDELER
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