| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0511 |
|---|
| Symbol | |
|---|
| ID | 4808311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 623795 |
|---|
| End bp | 625117 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640105924 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001036941 |
|---|
| Protein GI | 125973031 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000775208 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAA AGAAAGATTT AAAAAAGCCA TATCCACTTA AATTAAAAAA ATCCGGAAGA
AAGCTGCTTG CTGAAAGATA TTACCAAATT CTTAGAAGAA AATATAATTG CCTTTATGAG
ATTTTTAACA GTATTGAACT TCCGATAGTA AGTATATCCT ATCCGAGTTT TAATATAATT
GGAATTAATA ATAAAGCCAA GAAAGATGTA AAGCTTTTGC GTAAATGTGT TGCATTTGTA
AGAGAGGTTA AAAAAGGTAA TAATATATTA AATGCTTTAT CAAAAGTATA TTCTTGTCGA
AACCAAAAAT ATTTAGCTGA AATGCTTTTT ACAAAGTCGC CGGTATATCT TCCTAATGTT
GAAATTGATA ATAATGGCAG AAAAATTTAT TATAAATTAA TGCACCAGCC GATTTTAAAT
TCTCGTAATA AAATAGTAGG TTTTCTGATA ATTCCCATTG ATATAACCCA GGAGATAGAA
CAGAAAAAAT ATATAGAAAA TCTGGCCAGA TTCAAAGATG AGTTTTTGTA CGGCATAACC
CATGAGTTCA AAACTCCTCT GGTAGTTATA AGCTCGGCTT TGCAGGCAAT AGAGGCTCTT
TGCAGAGATG AGCTTACCGA CAGGGTAAAA AAATACTTAA ACAGGATTAA GCAAAATACC
TTCAGGCAAA TAAGGCTTGT AAATAATTTG CTGGATATAG CCAGAATTGA GGCCGGTCAT
ATCAAAATAT TCAAGAGGAA TCTGGATATT GTTGCTTTGA CTCGTCTGAT AACCGAGTCA
GTATCAATGT TTGCCGATTT AAAAGGTGTA CAGCTCTTGT TTTATTCCAA TATTGATAAA
AAGATTATTG CTATTGATGA AGAAAAATAT GAACGGATTA TGCTTAACCT GCTCTCAAAT
GCAATTAAAT TTACCCCCAA AGATAGATCG GTATATGTGG AAGTTTCAGC TAAGGAGGGA
TGTGTGGAGA TAAAAGTCAA AGACAGTGGA ATAGGGATAC CCAAAGATAA AATCAAGACC
ATTTTTGAAA GGTTCGGGCA GGTGGACAGT TCATTGTCAA GAAATGCCGA GGGTACAGGT
ATAGGATTGT CCCTGGTTCG CATGTTTGTA AATGCTATGG GCGGAGAAAT TAGTGTGACG
AGCGAAGAAA ACATTGGCAG TACTTTTACA GTCACTTTGC CTGATGCCGT AACTGAATGC
GGATATGAAA ATGACTGTTT TGACGATTTG AGAGATGAGC GTTTGATACA AGCTATCAAA
ATAGAGTTTT CGGATATATA TTTTGAGGAA AAGGAAGACA AAAAGAAAAG CCTTGAAACT
TAA
|
|---|
| Protein sequence | MNIKKDLKKP YPLKLKKSGR KLLAERYYQI LRRKYNCLYE IFNSIELPIV SISYPSFNII
GINNKAKKDV KLLRKCVAFV REVKKGNNIL NALSKVYSCR NQKYLAEMLF TKSPVYLPNV
EIDNNGRKIY YKLMHQPILN SRNKIVGFLI IPIDITQEIE QKKYIENLAR FKDEFLYGIT
HEFKTPLVVI SSALQAIEAL CRDELTDRVK KYLNRIKQNT FRQIRLVNNL LDIARIEAGH
IKIFKRNLDI VALTRLITES VSMFADLKGV QLLFYSNIDK KIIAIDEEKY ERIMLNLLSN
AIKFTPKDRS VYVEVSAKEG CVEIKVKDSG IGIPKDKIKT IFERFGQVDS SLSRNAEGTG
IGLSLVRMFV NAMGGEISVT SEENIGSTFT VTLPDAVTEC GYENDCFDDL RDERLIQAIK
IEFSDIYFEE KEDKKKSLET
|
|---|
| |