Gene Cthe_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0503 
Symbol 
ID4808356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp613963 
End bp614514 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content39% 
IMG OID640105916 
Product2'-5' RNA ligase 
Protein accessionYP_001036933 
Protein GI125973023 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000000682832 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACTT TTGTAGCGGT TGATTTTAAT ACGGAATTGA AAAAAGAAAT ATTAAAACTT 
CAGACACAAC TTAGAAATTT GGCTGTTTCG GGAAGATGGA AATATATTAA CAATTTTCAC 
CTTACCCTGA AATTTCTGGG TGAAATAGAA AAATCCAAGG TTCAAGATAT TAAAAAAGGG 
CTTGATGAGG TATGTGGCAA AACCCAAAAA TTTTGTCTTA ATATAGACGG ACTTGATTTT 
TTTCCGGGAA ACGGCTGCCT TAGGGTGCTG TGGTTGAAGC TTGCCGGTGA GCTTGAAAGC 
CTTCACAGCC TTCAGTCGGA AATAGACATA ATGTTGGAGA AACTGGGGTT TGAAAAGGAA 
AAAAGACGCT ATGTGCCGCA TGTAACCATA GCACAGGATG TGGTGTTCAA CAAGGATTTT 
GAAGAAATTA AAGGTCTTGT TGGAAACTAT CGGTTTGCAA CAATTGAAGT TCAGAGCGTT 
AATCTTTTTA AAAGCGAGCA AATAGGTGGC AAACGGGTTT ACACTCCGTT GACGGAGCAC 
AAGCTTGTTT AG
 
Protein sequence
MRTFVAVDFN TELKKEILKL QTQLRNLAVS GRWKYINNFH LTLKFLGEIE KSKVQDIKKG 
LDEVCGKTQK FCLNIDGLDF FPGNGCLRVL WLKLAGELES LHSLQSEIDI MLEKLGFEKE 
KRRYVPHVTI AQDVVFNKDF EEIKGLVGNY RFATIEVQSV NLFKSEQIGG KRVYTPLTEH 
KLV