| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0498 |
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| Symbol | |
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| ID | 4808351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 609535 |
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| End bp | 611163 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640105911 |
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| Product | hypothetical protein |
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| Protein accession | YP_001036928 |
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| Protein GI | 125973018 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.578621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGATG TTACGAAAGG CTCATTCAAT GACAGTCCGA ATAACGGTTT TTTTGAGATC
CAGTATAAGG AAGACGGAGT ATATCTTACA GTGCATCCGC CAATAGGAAA AGGCAAGGCG
GTTGAAGTAA ACGATGTAAT AAGCAGGCTT ACGCAGAAGA AAATTGTCTA TGATAAAGAA
ATGGTTGAAT TGGCTGTTCA GAGAGCGTCA AACGTACCTG TGAAAATTGG CGAACCTCAG
GAGGAACTTA AACTTGATGC GACAATAGAT GTTAACATTT CCCCGGACAA AATGAAAGCA
ACAATGGTAA TAAGACCCCC TGACGGTGGA AGAATGCTTA CTAAAGACGA GATGATGGAG
ATTTTGAAAA ACAGCGGGGT AAGATACGGA ATAAACGAGT CAATGCTTGA GAATGTTTCA
AAATATCCTG TCTATAATGA GATTATAGTA ATTGCCGAAG GTACGCCTCC CATAAACGGA
CAGAATGGAA AAGTGGAATT CCATTTTGAT TTGAAAAAAG AAAGAAAACC TACTATCCTT
GAGGATGGAA GGGTGGATTT CAGAGAACTG AATCTTATTG AAAGTGTAAA AAAAGGACAG
GTTCTCTGTA CACTGGTTCC TCCGCTTCCG GGTACACCGG GCAGAACGGT GGAGGATATC
GAGGTTCCGG CTTTGGACGG AAAACCTGCC GTGCTTCCAA AAGGGAAAAA TGTTGAAATA
AGTGAAGACG GACAAAGTCT TATTGCCGGC ATAGACGGAC AGGTAAATTA TATAGACGGC
AAGGTAAGTG TTTTTGCCAA TTATGAAGTT CCTGCAGACG TTGACAACTC CACCGGAAAC
ATAAGTTTTG TAGGCAATGT TATCATAAGA GGAAATGTTT TGTCCGGTTT TACCGTTGAA
GCCGGAGGCA GTGTTGAGGT AATGGGAGTG GTGGAAGCTG CCGTTATAAA GGCCGATGGT
GACATTATTC TAAGAAGGGG AATGCAGGGG CTTGGAAGAG GAATATTAAA AAGCGGCGGT
GACATAATTG CAAAATATAT AGAAAACAGC ATTATTGAAG CCAAAGGTGA CATAAAAGCC
GAGGCAATAA TGCACAGCAA CGTAAAATGC GGAAACAAGC TGGAGCTTTC CGGCAAGAAA
GGTCTTTTGA TAGGCGGAAA ATGCAAAGTG GGAAAAGAAA TAGTAGCGAA GGTTATCGGT
TCGTATCTTG CCACTCACAC CGATATTGAG GTGGGTGTTG ATCCGCAGAT TAAAGAGCGC
TACAAGGAGC TTCGGGATGA GATTCGGAAA ATAGAAGAGG ATTTGGTTAA AGCGGAACAG
GCCATAACAA TATTAAAGAA GCTTGAGGCC GCAGGAAAGC TTACTCCGGA GAAGCAGGAA
CTGATGGCCA GAAGCATTAG AACAAAGATT TATTATTCGA ACAGGCTTGG TGAATTAAAA
GAAGAATTGA TAATAACAGA GCAAAGGCTT CAGAAGGAGG CTGACGGAAA AATCAGGGTA
TTTGATCATA TATATCCGGG AACAAAAGTT ACAATAGGGA CGAGCATGAT GTATGTCAAA
GAGGACCTGC AATATTGTAC ATTATACAGG GACGGGGCTG ATATAAGAGT TGGGCCTATT
GACAAATAA
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| Protein sequence | MRDVTKGSFN DSPNNGFFEI QYKEDGVYLT VHPPIGKGKA VEVNDVISRL TQKKIVYDKE
MVELAVQRAS NVPVKIGEPQ EELKLDATID VNISPDKMKA TMVIRPPDGG RMLTKDEMME
ILKNSGVRYG INESMLENVS KYPVYNEIIV IAEGTPPING QNGKVEFHFD LKKERKPTIL
EDGRVDFREL NLIESVKKGQ VLCTLVPPLP GTPGRTVEDI EVPALDGKPA VLPKGKNVEI
SEDGQSLIAG IDGQVNYIDG KVSVFANYEV PADVDNSTGN ISFVGNVIIR GNVLSGFTVE
AGGSVEVMGV VEAAVIKADG DIILRRGMQG LGRGILKSGG DIIAKYIENS IIEAKGDIKA
EAIMHSNVKC GNKLELSGKK GLLIGGKCKV GKEIVAKVIG SYLATHTDIE VGVDPQIKER
YKELRDEIRK IEEDLVKAEQ AITILKKLEA AGKLTPEKQE LMARSIRTKI YYSNRLGELK
EELIITEQRL QKEADGKIRV FDHIYPGTKV TIGTSMMYVK EDLQYCTLYR DGADIRVGPI
DK
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