| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0495 |
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| Symbol | |
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| ID | 4808348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 607486 |
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| End bp | 608142 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640105909 |
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| Product | RNA polymerase, sigma 28 subunit |
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| Protein accession | YP_001036926 |
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| Protein GI | 125973016 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATCCG CGAGCAACAA ACAACTGGAA TTATGGAAAC AGTATGCTGA TACTAAAAAT
CCTGCGATAA AAGAACAACT GATTATTGAA TACTCAAATA TTGTCAAGTA CATTGCAGGC
AGACTCAGCA TATACTTTGG TTCCAATGTT GAATATGATG ATTTGATCGG ATATGGAATA
TTTGGCCTCA TTGACGCAAT TGAGAAGTTT GACATCAACA AGGGAGTCAA GTTTGAAACT
TATGCGTCGT TAAGGATCAG GGGCTCAATT ATTGACAGTA TAAGGGAGCT GGATTGGGTT
CCAAGATCTT TGAGGCAGAA GAATAAAGAA CTGGAAAAGG TCTATGCCGA AATAGAGAAT
GAACTTGGAC GTTCCGCTTC GGACAAAGAG GTGGCGGACA AGCTTGGAAT AACCGTCGAT
GAATTGAACA AACTATTAAA TGAAGTAAAT CTTTCATCGA TGATATCTTT GGAAGAGTTT
TTGGAGCAAA ACTATGAGAT AGGTGTTACG ACAGCTCCGG AAAGCAGGGA TGAAAAACCC
GAAGGTTATA TAGAAATGGC GGAGCTCAGA GAAATACTGG CAGATGCTAT AAGCAAACTC
CCGGAGAAAG AAAAAATGGT TATTACTTTA TATTATTTTG GGGAAGTTGT AAAATAA
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| Protein sequence | MASASNKQLE LWKQYADTKN PAIKEQLIIE YSNIVKYIAG RLSIYFGSNV EYDDLIGYGI
FGLIDAIEKF DINKGVKFET YASLRIRGSI IDSIRELDWV PRSLRQKNKE LEKVYAEIEN
ELGRSASDKE VADKLGITVD ELNKLLNEVN LSSMISLEEF LEQNYEIGVT TAPESRDEKP
EGYIEMAELR EILADAISKL PEKEKMVITL YYFGEVVK
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