Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0493 |
Symbol | |
ID | 4808346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 606537 |
End bp | 607022 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640105907 |
Product | chemoreceptor glutamine deamidase CheD |
Protein accession | YP_001036924 |
Protein GI | 125973014 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAATA TTATAAGAAT TGGGATGGCT GATTTGAAAG CATCGCATCA TCCTGCGATA TTAACTACTC TGGGACTTGG GTCATGCGTG GGAATAGCAC TTTATGACAG AACTACAAAA ATAGTGGGGC TGGCTCATGC AATGCTTCCT GACAGTTCCC AGGTAAAAAA TAAAACTAAC GCCGCAAAAT TTGTAGATAC CGCTATTGAA CTCCTTGTGA AAGAAATGCT GAGTCTTGGC GCGTCAAAGA AAAGAATTGT CGCAAAGCTG GCCGGAGGAG CGCAGATGTT TACTTTTACA CAAGGAGCCG AATTAATGCG TATCGGTCAA AGAAATGTGG CGGCGGCAAA AAGCAAACTG GAGAGTCTCG ACATTCCCGT AGTCTCCGAG GATACCGGAG GTAATTACGG GCGTACTGTT GAGCTTGATT CGGAGAGCGG CATGCTCCTG ATTAGAACCA TAGGATATGG AACTAAACAA ATATGA
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Protein sequence | MGNIIRIGMA DLKASHHPAI LTTLGLGSCV GIALYDRTTK IVGLAHAMLP DSSQVKNKTN AAKFVDTAIE LLVKEMLSLG ASKKRIVAKL AGGAQMFTFT QGAELMRIGQ RNVAAAKSKL ESLDIPVVSE DTGGNYGRTV ELDSESGMLL IRTIGYGTKQ I
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