Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0480 |
Symbol | |
ID | 4808333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 593788 |
End bp | 594285 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640105894 |
Product | hypothetical protein |
Protein accession | YP_001036911 |
Protein GI | 125973001 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000265 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGACTT TTATCAGTGC CGTTATGTTT ACCGTTGTTT TTGGTTCTGT GCTCTTTTTG GCATATGTCA CCACGAAATT TATCGGAACC AGAACAAACA AAATTGTTAA AGGCAAATAT ATAAAAATAA TCGAAACGGT CAATTTGGGA TTTGACAGCA GGCTTCATCT TGTAAAGGCC GGAGAAGAGT TTGTGCTGAT ATCAACTTGC GGGAAAAATG TCCAGATGTT GGCCAAGGTG AAATTGGAAG GCTATTATTC CGATGAAGCC GAAGAAACTG AAAACGATTT TAAATTCAGG GAAATTTTTA GTAAATATGC ACAGGGCTTT TCAAAGAAGA TGGAAGGTAT GTCTTTTTTC AAAGCGGAAA GCGGTGAGAA AGAACAAACC GGAAGTGTAC CGGTATTTAA TACAAATTTG AACCGGCTTA AAAAAATTAC GGCAAGTATC GCAAGTTACA AGACAGAAGA TGGAGAGGAA TATACCAATG AAAACTAG
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Protein sequence | METFISAVMF TVVFGSVLFL AYVTTKFIGT RTNKIVKGKY IKIIETVNLG FDSRLHLVKA GEEFVLISTC GKNVQMLAKV KLEGYYSDEA EETENDFKFR EIFSKYAQGF SKKMEGMSFF KAESGEKEQT GSVPVFNTNL NRLKKITASI ASYKTEDGEE YTNEN
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