Gene Cthe_0469 details

Gene Information

• Locus tag: Cthe_0469
• ID: 4808322
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 584109
• End bp: 584567
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640105883
• Product: flagellar export protein FliJ
• Protein accession: YP_001036900
• Protein GI: 125972990
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2882] Flagellar biosynthesis chaperone
• TIGRFAM ID: [TIGR02473] flagellar export protein FliJ

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.554161
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAATTG TGGGAAAATT TGTTTTTAGA ATGCAGTCTC TGCTGAACCT GAAAATTCAA 
ATGGAAAACA GCCTTAAAAA TGAACTGGGA AAAGCGGTCC GGGAATTGGA AAGGCAAAAG 
GATATATTAA ACAGGCTCAA TAGAGAAATG AATGAATGTA TCGAAAACAT AAACGGTAAA 
TTTGGTGAAG GAATATCGGT GGGAGAGCTT CGCAAATACA ATACCTACAT ATCTTATCTT 
AGTGACAGGG TAAAGCTTCA AAAAGAAAAT ATTAAGAAAG CGCAATTAGT TGTCGATAAA 
TATAGAGATA AGCTGATTAA AGCCATGCAG GAGCGAAAAG TGCTTGAAAA GCTAAGGGAA 
AAAAAGTATG AAGAGTATGT AAGAGAGCAG CTTAAGGAAG AACAAAAGCT CAACGACGAA 
ATTGTAAGCT TTAACATAAG CAATTCGGAA GAAGAGTAA 

 

Protein sequence

MIIVGKFVFR MQSLLNLKIQ MENSLKNELG KAVRELERQK DILNRLNREM NECIENINGK 
FGEGISVGEL RKYNTYISYL SDRVKLQKEN IKKAQLVVDK YRDKLIKAMQ ERKVLEKLRE 
KKYEEYVREQ LKEEQKLNDE IVSFNISNSE EE