Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0458 |
Symbol | |
ID | 4808386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 572004 |
End bp | 572759 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640105872 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001036889 |
Protein GI | 125972979 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000273086 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAAT TAATATCATG GAATGTCAAT GGTCTGAGGG CCTGTATAAA CAAGGGATTT TTAGATTATT TCAAAAAAGC CGATGCAGAT ATATTTTGCA TACAGGAAAG CAAGGTTCAG CCCGGGCAAA TTGAGCTTGA ACTTGACGGG TATCATCAAT ACTGGAATTA TGCTGAGAGG AAAGGATATT CCGGTACTGC GGTGTTTACC CGTATAAAGC CTCTTTGTGT TCAGAATGGT ATTGGAATTG ACGAACATGA CAGGGAAGGC AGGGTAATAA CCCTGGAATT TGACAATTAT TATTTGGTCA ACGTGTATAC TCCCAACGCG AAGAAAGAGC TGGAAAGGCT TGATTACAGA ATGAAATGGG AGGATGACTT CAGAAATTAT CTTGTCGGGC TTAAGGCCAA AAAGCCGGTG ATTGTCTGTG GAGACATGAA TGTGGCCCAT AAGGAGATTG ACCTTAAGAA TCCGGAATCC AACAGAAGAA GCGCCGGTTT TACCGATGAA GAGCGCGCAA AATTTACGGA GCTTCTTAAT GCTGGTTTTA TTGATACTTT CAGATTTTTC TATCCTGATA AAACGGGTGC GTATACATGG TGGTCATACA TGTTTAATGC CCGTGCCAGG AATGCAGGGT GGAGAATTGA TTATTTTTGT GTGTCGGAGG AACTAAAAGA CCGTCTTGTA AGTGCCTCCA TACATGATGA TGTGATGGGC TCGGACCATT GTCCGGTAGA GCTTCAAATA AAATAG
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Protein sequence | MTKLISWNVN GLRACINKGF LDYFKKADAD IFCIQESKVQ PGQIELELDG YHQYWNYAER KGYSGTAVFT RIKPLCVQNG IGIDEHDREG RVITLEFDNY YLVNVYTPNA KKELERLDYR MKWEDDFRNY LVGLKAKKPV IVCGDMNVAH KEIDLKNPES NRRSAGFTDE ERAKFTELLN AGFIDTFRFF YPDKTGAYTW WSYMFNARAR NAGWRIDYFC VSEELKDRLV SASIHDDVMG SDHCPVELQI K
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