Gene Cthe_0450 details

Gene Information

• Locus tag: Cthe_0450
• Symbol: nrdR
• ID: 4808378
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 564796
• End bp: 565251
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640105864
• Product: transcriptional regulator NrdR
• Protein accession: YP_001036881
• Protein GI: 125972971
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00111
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTGCC CATATTGCGG TTATATTGAG GATAGGGTTA TCGATTCAAG GCCAACGGAT 
GAGGGGTCGG CAATACGGAG AAGAAGAGAA TGTTCCAAAT GCCTGAAAAG ATTTACCACC 
TATGAAAAGG TTGAAAGTCT TCCCATTATG GTCATAAAAA AAGACAAGAG CAGACAGGCT 
TTTGACCGGG AGAAGCTTTT AAACGGAATT TTGAGGGCAT GTGAAAAAAG GCCTGTATCC 
ATTGAACAAC TGGAAAAACT GGTTGATGAC ATTGAGAGTC AAATTCATAA TTCCCTGCAG 
AGGGAGGTTA CTTCCAAAGA TATCGGAGAA ATGGTAATGG CAAAGCTCAA AAACTTGGAT 
GAAGTGGCTT ATGTTAGGTT TGCGTCGGTT TACAGGCAGT TTAAGGATAT AAATACCTTT 
ATGGACGAGC TTCGCAAGCT TTTAAACGAG AAGTAG 

 

Protein sequence

MKCPYCGYIE DRVIDSRPTD EGSAIRRRRE CSKCLKRFTT YEKVESLPIM VIKKDKSRQA 
FDREKLLNGI LRACEKRPVS IEQLEKLVDD IESQIHNSLQ REVTSKDIGE MVMAKLKNLD 
EVAYVRFASV YRQFKDINTF MDELRKLLNE K