Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0448 |
Symbol | |
ID | 4808376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 563358 |
End bp | 564131 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640105862 |
Product | sporulation sigma factor SigG |
Protein accession | YP_001036879 |
Protein GI | 125972969 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02850] RNA polymerase sigma-G factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000243038 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAGTCA ATAAAGTAGA AATATGTGGT GTGAACACAT CAAAGTTGCC AGTACTTACC AATGAACAAA AGAAAGAGCT CTTCGAAAGA ATGCATAAAG GAGATACCTC GGCAAGAGAG GAATTTATAA AGGGAAATTT GAGGCTTGTG TTAAGTGTTA TCCAGAGATT TAACAATAGA GGGGAATATG TTGACGACCT TTTTCAGGTC GGATGTATAG GTCTTATAAA GGCAATTGAC AATTTTGACG TTACTCAGAA TGTTAAGTTT TCCACATATG CTGTTCCCAT GATAATTGGA GAAATCCGAA GATATTTGAG GGACAACAAT GCGATTCGTG TAAGCAGATC TTTGAGAGAT ATTGCCTATA AAGCGCTTCA GGCAAAAGAA AAACTTACAA ATCAAAATTC AAAAGAGCCT ACCATAGAGG AAATAGCCAA AGAACTGGGC CTTCCAAAGG AAGAAGTTGT GTTTGCTTTG GATGCAATAC AGGATCCGAT TTCTCTGTTT GAATCCGTGT ATCATGACGG TGGAGATGCA ATTTATGTGA TGGACCAGGT AAAAGACGAG AAAAATAATG ATGAAAACTG GCTTGAAGGT ATAGCTTTAA GTGAAGCTAT GAGAAAACTC AATGACCGGG AAAAGCTTAT ACTGAATTTG CGCTTTTTTG ACGGCAGAAC CCAGATGGAA GTTGCTGAAG AAATAGGAAT ATCGCAGGCC CAGGTTTCAA GACTTGAAAA AACTGCGCTT ATGCATATGA GAAAGTATAT TTGA
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Protein sequence | MLVNKVEICG VNTSKLPVLT NEQKKELFER MHKGDTSARE EFIKGNLRLV LSVIQRFNNR GEYVDDLFQV GCIGLIKAID NFDVTQNVKF STYAVPMIIG EIRRYLRDNN AIRVSRSLRD IAYKALQAKE KLTNQNSKEP TIEEIAKELG LPKEEVVFAL DAIQDPISLF ESVYHDGGDA IYVMDQVKDE KNNDENWLEG IALSEAMRKL NDREKLILNL RFFDGRTQME VAEEIGISQA QVSRLEKTAL MHMRKYI
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