| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0433 |
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| Symbol | |
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| ID | 4808361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 543569 |
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| End bp | 545938 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640105847 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001036864 |
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| Protein GI | 125972954 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.371525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGAGA AAAAAATCTT TTCAAAAAGA ACAAAAGCAT TAATAGTTAG TTTTGTAATT
CTTGCTTTGA TGGTTTTCCC TGTCGGTACT GTCAATATTA GTGCCGCTAA TGTGGAATAC
AACTATGCAA AGGCGTTGCA GTATTCCATA TACTTTTACG ATGCAAATAT GTGCGGTACC
GGGGTTGACG AGAACGGACA GTACAACTGG AGAGGCGACT GCCATGTTTA TGATGCGGAA
CTTCCGCTCG ATTCTGTAAA CACCAATATG TCCGATGCAT TTATCAGAGA GAACATAAGT
GTACTTGATC CTGACGGAGA CGGTAAAGTT GATGTTTCCG GCGGTTTTCA TGATGCCGGT
GACCATGTGA AATTCGGTAT GCCTGAAGCA TATTCCGGTT CCACACTGGG ATGGGGATAT
TATGAATTCA GGGAACAGTA TAAGCAGACA GGACAGGATC AGCATATCGA GACGATTTTG
CGTTATTTTA ATGATTATTT CATGAGATGT ACTTTCAGAG ATAAAGACGG CAATGTAGTT
GCGTTTTGTT ATCAAGTGGG TGACGGTGAC ATTGACCATG CTTACTGGAA TCCACCTGAA
ATTGATGATA TGTTCCGTAG AGGATGGTTT GCCACTAAAC ATTTGCCTTC AACGGATTGC
GTGTCCGCAG CTGCTGCTTC TCTTGCAGTA AACTATTTCA ACTTCAAAGA TACAGACCCT
GAATATGCCG AAAAAAGCCT TGACTATGCA AAAGCATTGT TTGACTTTGC ACAAAAAAAT
GACAAAGAAG TTAATGCAGA CGGTCCTAAA GGATATTATA CTTCTTCAAA ATGGCAGGAT
GACTACTGCT GGGCTGCGGC ATGGCTTTAC CTTGCAACCC AGGATGACAA TTATTTGAAT
GAACTGTTTA AGTATTATGA TTATTATGCA CCTTCCTGCT GGACTCACTG CTGGAATGAC
GTTTGGGCAG GTACGGCATG CATTTTGGCT CAAATAGACG ATCTTTACGA CAAAGACAGC
GAGGAGTTTG AAAACAGGTA CAGACAGGCT GCAAATAAGA GTCCTTATGA ACCGATAGAT
TTTTGGGCCG AGGTTGCAAA ACTGGTAGAG AACTGGATGT ACGGTAAGAC TGTTACAATT
ACTCCCGGTG GATATGCATT CCTTAACAAA TGGGGTTCGG CAAGATACAA CACAGCTACA
CAGTTTGTAG CTCTTGTGTA TGACAAACAC CATGGTGATG CGCCTTCAGC ATACAGTCAA
TGGGCAAGGT CGCAAATGGA GTACCTTATG GGAAACAATC CTCTTAATCG TTGCTACATT
GTAGGATACA GCGATATTTC CGTAAAATTC CCGCACCATA GGGCGGCATC AGGTTTGTCA
AAATGTGAAG ACCCTGATCC TCACAAATAT GTATTGTATG GTGCGCTGGT CGGCGGACCG
GATGAGAATG ACCAACATAT AGATATGACA TCAGACTGGG TTTACAATGA AGTTACAATA
GACTACAATG CTGCTTTTGT TGGTGCATGT GCCGGCCTTT ACAGATACTT TGGGGATCCT
TCAATGGAGA TTACACCTAA TTTCCCGCCG AAGGTCGAGA TATCGGACCC TGACAACGGA
GGTTCCTATT GGGTAGAAGC ATTTGGTGTG GACATAGTAC AAAGCGATGG ACCAAAAGCA
ACTGAAGTCA CTTTGTATGT ACGTTCGGAT TCAAGGAAAC CGTCAAAGAA TATTTCCGTC
AGGTACTTCT TCGATGCCAC GGGGATGTCA TCGGTTGACC CTGACAAGAT GGAGATAAGA
CAGCTTTATG ACCAGACAGC GGCAGAGACG GATTATGCGG CCAAACTTAC AGGTCCTCAC
CATTATAAAG ATAATATTTA CTATGTGGAA ATATCGTGGG AAGGATTTGC AATCGCTAAT
TCCAATAAAA AATACCAGTT TGCGTTGGGT ACATACACAT GGGGCAACAG TTGGGATCCG
ACCGACGACT GGAGTTATCA GGAATTGAAG ATAGAAGAGA GTAATTATAC AGGAACTCCT
GCGAGAAACA ACAGAATATG TGTTTATGAT GCCGGTGTTC TTGTGGGAGG AATTGAGCCG
GACGGAACAA CACCTCAATC ACCTACTCCG TCGCCGACTC CCACACCTCC ACAGGAACCG
GAATTCACAT ATGGAGATTT AAACGGGGAC GGCAGGGTTA ATTCATCAGA CTTGGCTTTG
ATGAAGAGGT ATGTGGTTAA ACAAATTGAG AAATTAAATG TTCCGGTAAA AGCAGCTGAC
CTTAATGGAG ACGATAAAGT AAATTCAACC GATTATTCAG TCTTAAAGAG ATATTTGCTC
CGTTCAATCG AGGTTATTCC GATAAAATAA
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| Protein sequence | MREKKIFSKR TKALIVSFVI LALMVFPVGT VNISAANVEY NYAKALQYSI YFYDANMCGT
GVDENGQYNW RGDCHVYDAE LPLDSVNTNM SDAFIRENIS VLDPDGDGKV DVSGGFHDAG
DHVKFGMPEA YSGSTLGWGY YEFREQYKQT GQDQHIETIL RYFNDYFMRC TFRDKDGNVV
AFCYQVGDGD IDHAYWNPPE IDDMFRRGWF ATKHLPSTDC VSAAAASLAV NYFNFKDTDP
EYAEKSLDYA KALFDFAQKN DKEVNADGPK GYYTSSKWQD DYCWAAAWLY LATQDDNYLN
ELFKYYDYYA PSCWTHCWND VWAGTACILA QIDDLYDKDS EEFENRYRQA ANKSPYEPID
FWAEVAKLVE NWMYGKTVTI TPGGYAFLNK WGSARYNTAT QFVALVYDKH HGDAPSAYSQ
WARSQMEYLM GNNPLNRCYI VGYSDISVKF PHHRAASGLS KCEDPDPHKY VLYGALVGGP
DENDQHIDMT SDWVYNEVTI DYNAAFVGAC AGLYRYFGDP SMEITPNFPP KVEISDPDNG
GSYWVEAFGV DIVQSDGPKA TEVTLYVRSD SRKPSKNISV RYFFDATGMS SVDPDKMEIR
QLYDQTAAET DYAAKLTGPH HYKDNIYYVE ISWEGFAIAN SNKKYQFALG TYTWGNSWDP
TDDWSYQELK IEESNYTGTP ARNNRICVYD AGVLVGGIEP DGTTPQSPTP SPTPTPPQEP
EFTYGDLNGD GRVNSSDLAL MKRYVVKQIE KLNVPVKAAD LNGDDKVNST DYSVLKRYLL
RSIEVIPIK
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