| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0420 |
|---|
| Symbol | |
|---|
| ID | 4808423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 528909 |
|---|
| End bp | 529781 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640105834 |
|---|
| Product | dipicolinate synthase subunit A |
|---|
| Protein accession | YP_001036851 |
|---|
| Protein GI | 125972941 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0373] Glutamyl-tRNA reductase |
|---|
| TIGRFAM ID | [TIGR02853] dipicolinic acid synthetase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAATA AAAAATTTAC AATTATCGGC GGTGATCTTA GGAGTGTCAA GCTGGCTGAG
TTGATTGTAG CGGAAGGGAA TAAAGTTAAC ATATATGGGT TTAAGAATGC TAACTTCGAG
ATAGGTATTG AAGAAAGCGA AGATCTTGAC CACGCTATTG GGGAGGCGGA TGTAATAGTA
GGTCCTACTC CATGTTCAAC AGATAATGAA ACAATTAATA CACCTTTTCA TTCTCAAAAA
ATTTTTATTA AAGACATATT CAAAAAGATG AATAAAAGCC AGTTGTTTAT TGCCGGAAGA
ATAACCGATA AGATTGCCCA GCTTGCAGAT GTCTACAACG TATATTCAGT TGATTTGCTT
GAAAGAGAAG AAATGGCGGT TTTAAATGCC ATTCCGACTG CAGAAGGGGC AATTCAAATT
GCAATGGAGG AAATGCCTAT AACTCTTCAT GGAAGCAATG CATTAATTTT AGGGTTCGGA
AGAATTGGAA AGATACTTGC AAAAATGCTC CATGGAATTG GAAGCAACGT GTATGTCGAG
GCCAGAAAAT ATTCCGACCT GGCTTGGATT GAAAGTTATG GATACAAACC GGTTTTCATA
ACTGAGCTTG AAAGTTACAT AGACAGGGCA AATGTTATTT TTAATACTAT TCCCAGCATT
GTACTGGATG AAAATTTGCT CAGGAAGGTA AACAAGGATT GCCTTTTGAT AGATCTTGCT
TCCAAGCCTG GCGGAATTGA CTTTGAAAAA GCAAAAGAGA TGGGATTAAA AACAATATGG
GCTCTTTCTC TTCCGGGAAA AGTAGCACCG GTGACAGCAG CAAAATTCAT AAAAGACACT
ATTAGCAATA TTATTGATGA GTTGGGGGTA TAA
|
|---|
| Protein sequence | MKNKKFTIIG GDLRSVKLAE LIVAEGNKVN IYGFKNANFE IGIEESEDLD HAIGEADVIV
GPTPCSTDNE TINTPFHSQK IFIKDIFKKM NKSQLFIAGR ITDKIAQLAD VYNVYSVDLL
EREEMAVLNA IPTAEGAIQI AMEEMPITLH GSNALILGFG RIGKILAKML HGIGSNVYVE
ARKYSDLAWI ESYGYKPVFI TELESYIDRA NVIFNTIPSI VLDENLLRKV NKDCLLIDLA
SKPGGIDFEK AKEMGLKTIW ALSLPGKVAP VTAAKFIKDT ISNIIDELGV
|
|---|
| |