| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0418 |
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| Symbol | |
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| ID | 4808421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 525212 |
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| End bp | 527314 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640105832 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001036849 |
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| Protein GI | 125972939 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAA CTTTCAGCAT GGAGCTAGCC GGAAGAACAC TTACTATTGA AACTGGGAAA
CTTGCTCAAC TGGCAAACGG TTCAGTATTG GTCAGATACG GTGATACTGT TGTACTCTCA
ACAGCTACCG CTTCGGCAAC ACCAAGAGAG GGAGTCGATT TTTTTCCTTT GAGTGTGGAT
TATGAAGAAA GATTGTATGC TGTAGGAAAA ATTCCCGGAG GTTTTATAAA AAGAGAAGGT
AAACCGTCGG AAAAGGCAAT ACTTACAGCC AGAGTTATAG ATAGACCCTT AAGGCCTTTG
TTCCCCAAGG ACTTGAGGAA TGATGTGGCT ATTGTAAATA CAGTTTTGTC CGTTGATCAG
GACAATTCAC CGGAACTTGC CGCTTTATTG GGATCCTCCA TTGCCGTGTC AATTTCGGAC
ATACCGTTTA ACGGTCCTGT CGGAGCAGTT ATTCTGGGGC TTATTGACGG TGAAGTGATT
ATAAATCCGA CCGAAAAACA AAAAGAAATA AGCCAGATGT ATGTTACTTT GGCAGGCACA
AGGAATAAAA TTGTCATGAT AGAGGCAGGA GCAAACGAGG TTCCCGATGA AGTCATGCTG
GATGCCATCA AAAAAGGACA TGAGGAAATA AAGAAAATTG TTGACTTTAT TGACGGAATT
GTAAAGGAAG TCGGCAAACC TAAATTTGAA TATGAATCTG CGGAAGTTCC CGAGGAAATA
TTCAATGCCG TCAGGGAATA TGCTTATGAC AAGATGAGGG AAGCCGTACT TGCTGTGGAC
AAGCAGGTAA GAGACAAAAA CATTGATGAT CTTACAAAAG AAATAACGGA GCATTTTGCG
GAAGTGTTCC CTGAAATGGA ACCAGCCATT AAAGAAGCAA TATACAAACT GGAGAAGAAA
GTTGTAAGGG AATATATTTT GGAAGAGGGC AGAAGAGTTG ACGGCAGAAG ACTTGACGAA
ATAAGGCCTT TGTCGGCTGA AGTCGGGCTG CTTCCGAGAG TTCATGGTTC AGGTCTTTTC
ACAAGGGGAC AGACTCAGGT GCTTTCAAGT GTTACCTTGG GCGCCATGGG GGATGTTCAG
ATACTGGACG GTATTGACAC TGAAGAAACC AAAAGATATA TGCATCACTA TAATTTCCCT
GGATTCAGCG TTGGCGAAGC TAAGAGTTCA AGAGGTCCGG GAAGAAGAGA AATCGGTCAC
GGAGCTCTAG CGGAAAGAGC ATTGGAGCCT GTGATTCCAA GTGAAGAAGA ATTCCCTTAT
ACAATAAGGG TGGTATCTGA AGTTCTTATG TCAAATGGTT CCACATCTCA GGGAAGCGTT
TGCGGAAGCA CTCTGGCACT TATGGATGCA GGTGTGCCTA TCAAAAAGCC TGTTGCGGGA
ATTTCTGCCG GTTTGGTTGT TGACGAAAAT AATCCCGACA GGTTTGTTAC TTTTATGGAT
ATCCAAGGCA TAGAGGATTT CTTTGGAGAT ATGGACTTTA AAGTTGCCGG AACGAAGGAT
GGAATAACAG CCATTCAGGT TGATATAAAG ATAGACGGAC TTACGGAGGA AATTATAAAA
CAGGCATTTG AACTTACAAG AAAAGGTCGT TTGTATATTA TTGACAATGT GTTGCTGAAG
GCTATTCCGG AACCGAGAAA ACAAATGTCA AAATATGCGC CTAAGATTAT TTCAACTACC
ATAAATCCGG ATAAAATCAG GGAAGTAATA GGCCCCGGAG GTAAAATGAT AAACAAGATA
ATTGACGAAA CCGGAGTAAA GATTGATATA AACGACGACG GTAGAGTTTA TATATTCAGT
TCGGATATTC AAGCCGGAAA AAGAGCTCGC AGTATGATAG AGGCAATAGC AAAAGATATT
GAGCCAGGCC AGGTATTTTT GGGCAGAGTT ATCAGAGTTA CATCCTTTGG AGCTTTTGTA
GAGTTTCTTC CGGGAAAAGA AGGGCTTGTG CATATAAGCA AGCTGGACAA GAAGAGAGTC
GAAAGGGTTG AAGACATAGT AAGAGTCGGA GATCAGATAC TTGTTAAGGT TATAGAAATT
GACAAGCAGG GACGTGTAAA TCTTTCAAGA AAGGATGCAA TGGAAGATGA ATGGGATAAA
TAG
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| Protein sequence | MYKTFSMELA GRTLTIETGK LAQLANGSVL VRYGDTVVLS TATASATPRE GVDFFPLSVD
YEERLYAVGK IPGGFIKREG KPSEKAILTA RVIDRPLRPL FPKDLRNDVA IVNTVLSVDQ
DNSPELAALL GSSIAVSISD IPFNGPVGAV ILGLIDGEVI INPTEKQKEI SQMYVTLAGT
RNKIVMIEAG ANEVPDEVML DAIKKGHEEI KKIVDFIDGI VKEVGKPKFE YESAEVPEEI
FNAVREYAYD KMREAVLAVD KQVRDKNIDD LTKEITEHFA EVFPEMEPAI KEAIYKLEKK
VVREYILEEG RRVDGRRLDE IRPLSAEVGL LPRVHGSGLF TRGQTQVLSS VTLGAMGDVQ
ILDGIDTEET KRYMHHYNFP GFSVGEAKSS RGPGRREIGH GALAERALEP VIPSEEEFPY
TIRVVSEVLM SNGSTSQGSV CGSTLALMDA GVPIKKPVAG ISAGLVVDEN NPDRFVTFMD
IQGIEDFFGD MDFKVAGTKD GITAIQVDIK IDGLTEEIIK QAFELTRKGR LYIIDNVLLK
AIPEPRKQMS KYAPKIISTT INPDKIREVI GPGGKMINKI IDETGVKIDI NDDGRVYIFS
SDIQAGKRAR SMIEAIAKDI EPGQVFLGRV IRVTSFGAFV EFLPGKEGLV HISKLDKKRV
ERVEDIVRVG DQILVKVIEI DKQGRVNLSR KDAMEDEWDK
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