| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0407 |
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| Symbol | |
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| ID | 4808410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 508249 |
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| End bp | 509556 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640105821 |
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| Product | radical SAM family protein |
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| Protein accession | YP_001036838 |
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| Protein GI | 125972928 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00162852 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCTTC AAAAAAAGCT TGAAATATTA TCCGCCGCCG CAAAATATGA TGTTTCGTGT
TCCTCCAGCG GCAGCAACAG AAAAAATACC AAAGGAGGCC TGGGAAACGC AGCATCTTTC
GGTATATGCC ATAGCTGGTC TGATGACGGA AGGTGTATTT CTCTTTTAAA AATCCTTCTT
ACCAATTACT GCGTGTATGA TTGCGCCTAC TGTGTCAACA GAGTAAGCAA TGATATCCCA
AGAGCTGCTT TTACACCCCA AGAAGTGGCA AATCTTACAA TAAACTTTTA CAGACGAAAC
TATATTGAAG GTTTGTTCCT AAGCTCTGCA GTGGTAAAAA ACCCCAACCA TACAATGGAG
CTCCTTTATG AATCGCTAAG GATTTTAAGG AAAGAATACA GATTCAACGG CTACATACAT
GTCAAGGCTA TCCCGGGTGC TGACCTTGGC CTCATTGAAG CTGTCGGAAA ATTGGCTGAC
AGAATGAGTG TCAACATCGA GCTCCCTTCC GAAAACGGAC TTAAGCTTCT GGCCCCTCAA
AAAAATAAAC AGGCGATACT TAAGCCAATG AATTTTATAG CATCCAAGAT AACCGAAAAA
AGGGATGAGA GAAAGGTATT TAAAAATGCA CCTTTATTTG TTCCCGGAGG TCAGAGTACT
CAACTTATCG TGGGAGCCAC CCAGGACCAC GATATCAACA TTCTGAGGCT TTCTGAAAAC
CTGTACAAAA AATACAAACT TAAAAGAGTT TATTATTCGG CATATGTACC TGTATCCAAA
AATCCGCTTC TGCCCGATTT AAAGACTCCT CCGCTTCTTA GAGAACACAG GCTTTATCAG
GCTGACTGGC TTTTGAGATT TTACGGTTTT TCAGCGGACG AGCTCCTTGA TGAGCGCAAT
CCCGACTTTG ACCCCAAACT TGACCCAAAA ACAAACTGGG CAATTAACAA TATGTCCCTC
TTTCCTGTTG AAATAAACCG CGCAGACTAC GAAATGCTGC TTAGAGTTCC GGGCATCGGA
GTTCGCTCTG CCAAAAAAAT CATTATGGCA AGAAAAGTTA AATCATTATC CTTCGAAGAC
TTAAAAAAAC TTGGTGTCGT TCTAAAACGT GCAAAATTCT TCATTACCTG TAATGGCAAG
TATTTTTTCA ACTGTAACTT GGATCAGAAT TTAATAAGGC AAAACCTGAT TAATGGTTTT
GAAGATAATG AAAAAAGGCA GGAATGGGAG CAAATTTCGA TTTTTTCTCT AATACCGGAA
AAACCGACTC TTCAAGACCA AATAATGAGC ATAACCGGAG AAATATAA
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| Protein sequence | MELQKKLEIL SAAAKYDVSC SSSGSNRKNT KGGLGNAASF GICHSWSDDG RCISLLKILL
TNYCVYDCAY CVNRVSNDIP RAAFTPQEVA NLTINFYRRN YIEGLFLSSA VVKNPNHTME
LLYESLRILR KEYRFNGYIH VKAIPGADLG LIEAVGKLAD RMSVNIELPS ENGLKLLAPQ
KNKQAILKPM NFIASKITEK RDERKVFKNA PLFVPGGQST QLIVGATQDH DINILRLSEN
LYKKYKLKRV YYSAYVPVSK NPLLPDLKTP PLLREHRLYQ ADWLLRFYGF SADELLDERN
PDFDPKLDPK TNWAINNMSL FPVEINRADY EMLLRVPGIG VRSAKKIIMA RKVKSLSFED
LKKLGVVLKR AKFFITCNGK YFFNCNLDQN LIRQNLINGF EDNEKRQEWE QISIFSLIPE
KPTLQDQIMS ITGEI
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