Gene Cthe_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0406 
Symbol 
ID4808409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp507482 
End bp508219 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content39% 
IMG OID640105820 
Producthypothetical protein 
Protein accessionYP_001036837 
Protein GI125972927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00000345216 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACACT ATTACTATGA CGGAACTTTT GACGGACTTT TGACTTGTGT ATACGAGTCA 
TATTACGGTG TTGAACCTCC AGACCGGATT TTTCGCTCAA AAAACATGCA GCAAAGCATT 
TTGGATAAAA ATATTGATAT TGTCACTGAC AGCGAAAAAG CCTCTAAAGT CTATGAAGCA 
ATATGCGAAA AAATTTCATA TGACGCCTTG AGAAATGTTT ACCACGCTTA CTTGTCAGAA 
CTTGACAATA TTGATACTTA CATACTCAGA TATTTAAGGA TTGGCTTTAA AAAGGGAAAA 
TCCGTGGACC TTTACCTTAC TTCCGAAGAA GTGCTAAAGG TTCATTCCGC GGCTAAAAAA 
GTACGGACGG AAAGCCATCT TATGCTGGGT TTGCTGAGGT TTAAAAAGTT GAAAGGGGGC 
CTTTACTATG CCCCCTACAG CCCTGTCTAC AATATTACCG TTTTAATATC CGACCATTTT 
GTACGGCGTC TGTCCGATCA ATTTTGGATA ATCCACGACA CCAAAAGAAA CTTTGCCGCC 
GTATACAATA CGTCGAAATG TGTTTTTACA GACCTTCCCG CAGAGCTTCA ATACCAATCC 
GCAAAGACAG ACGACCAATT TGAAGAATTA TGGAAGAATT ATTTCAACAG CATCTGCATA 
AAGGACAGAG TCAATCCAAA ACTGCAAAAG CAAAACATGC CCCAAAAGTA TTGGAAATAC 
CTGGTTGAAA AACAATAA
 
Protein sequence
MIHYYYDGTF DGLLTCVYES YYGVEPPDRI FRSKNMQQSI LDKNIDIVTD SEKASKVYEA 
ICEKISYDAL RNVYHAYLSE LDNIDTYILR YLRIGFKKGK SVDLYLTSEE VLKVHSAAKK 
VRTESHLMLG LLRFKKLKGG LYYAPYSPVY NITVLISDHF VRRLSDQFWI IHDTKRNFAA 
VYNTSKCVFT DLPAELQYQS AKTDDQFEEL WKNYFNSICI KDRVNPKLQK QNMPQKYWKY 
LVEKQ