| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0396 |
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| Symbol | |
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| ID | 4808399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 491956 |
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| End bp | 493680 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640105810 |
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| Product | ABC transporter related protein |
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| Protein accession | YP_001036827 |
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| Protein GI | 125972917 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000464799 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT TGTCGGTTTA TTTAAAGGGA TATATAAAGG AAAGTATTCT TGGACCCTTA
TTCAAACTTT TGGAAGCATC ATTTGAATTA CTGGTACCTA TTGTTATCAA ATCCATTGTT
GATACCGGCA TTGGGCGGGC TGACAAAGTA TATATCATTA AAATGTGCCT GTTGTTGATT
CTTTTGGGTG TTGTTGGAAT GGTATGTTCG GTAACGGCCC AGTATTTTGC CGCCAAAGCT
TCAGTGGGAT TTGTGACAAA GCTTCGCCGT GCACTGTTTA GACATATTGG CCAATTGTCT
TATACGGAAA TTGACACCCT TGGTACATCC AGTATGATTA CCCGTATGAC GAGTGATATA
AACCAGGTAC AGACCGGAAT GAACCTGACA TTGCGTCTGT TGCTGCGTTC ACCTTTTATT
GTGTTTGGTG CCATGATTAT GGCGTTTACT GTGGATACCA ATGCGGCTTT TACTTTTGTT
GTAGCCATCC CTGCGCTTTT TATAGTTGTT TTTGCAATTA TGCTGCTGTC CATTCCTCTT
TACAGGAAGG TACAGCAAAG GCTTGACAGA GTGTTAAAGT CAACAAGGGA AAATCTCACA
GGTGTCCGGG TGATTAGGGC TTTTCGCCTT GAAGAAAAAG AAATAGCTGA ATTTGACAAA
CGCAATGAAG AATTGACCTC AACACAGATA TTTGTAGGCA GAATTTCAGC TCTGATGAAT
CCTTTGACCT ATGTTATTAT TAATCTTGCC ATTATCTGGC TTATTCATAT CGGTGCAATC
CGCGTATCAA AGGGACTGCT TACGCAGGGA GCTGTTTTGG CACTCTATAA TTATATGTCC
CAAATTCTTA CTGAGCTTAT AAAATTCGCA AACCTAATCA TTAGCATTAC AAAAGCTGTT
GCCAGCGCCA ACCGTATCAG TGCGGTGCTG GATGTAGAAT CCAGTTTGGT GGAGAAAGAG
TCTGAGCCGC AAGGTGACAG GTCCGAATTT ATCGTTGAAT TTCACAATGT AGGATTGACG
TATAAAAATG CCGGTGCTGA AGCTTTAACA AATATTAATT TTTCAGTCCG CCGCGGTGAA
GTGGTTGGTA TCATCGGCGG TACAGGTTCC GGTAAAACTT CTTTGGTAAA TCTTATTCCG
AGGTTTTACG ATGCCACGGT AGGCGAGGTT ATTGTAGACG GTATTAATGT TAAGGATTAT
CCTTTGAAAA AGCTGCGTGA CAAGATAGGT GTCGTTCCGC AAAAAGCTGT GCTGTTTAAG
GGCAGTATCC GCGAAAATAT GCGTTGGGGA AATAAAAATG CAACCGATGA AGAAATCATG
GAAGCCATTA ATATTGCCCA GGCAGGAGAA ATTGTGGCTC AAAAGAAGGA AGGGCTTGAT
TTTCTTATTG AACAAGGAGG AAAAAACCTT TCGGGAGGGC AGCGTCAACG TTTTACCATA
GCACGGGCCA TTGTTAAAAA GCCGGAAATC TTAATTCTTG ATGACAGTGC TTCGGCTCTT
GACTTTGCGA CCGATGCAGC TCTTCGCAAG GCTCTTCGTG AGTTACCGTG GAATCCGACA
ATTTTTATTG TTTCGCAACG TACTTCATCG ATTCAACATG CTGATAAGAT TATAGTTCTC
GATGACGGAG AAATTGTTGG TATCGGTAAG CATGACGAGC TGCTTGAAAC TTGTGAGGTA
TATCGCGAAA TTTATGACTC ACAATTCAAG AAGGAGGAAA AATGA
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| Protein sequence | MKKLSVYLKG YIKESILGPL FKLLEASFEL LVPIVIKSIV DTGIGRADKV YIIKMCLLLI
LLGVVGMVCS VTAQYFAAKA SVGFVTKLRR ALFRHIGQLS YTEIDTLGTS SMITRMTSDI
NQVQTGMNLT LRLLLRSPFI VFGAMIMAFT VDTNAAFTFV VAIPALFIVV FAIMLLSIPL
YRKVQQRLDR VLKSTRENLT GVRVIRAFRL EEKEIAEFDK RNEELTSTQI FVGRISALMN
PLTYVIINLA IIWLIHIGAI RVSKGLLTQG AVLALYNYMS QILTELIKFA NLIISITKAV
ASANRISAVL DVESSLVEKE SEPQGDRSEF IVEFHNVGLT YKNAGAEALT NINFSVRRGE
VVGIIGGTGS GKTSLVNLIP RFYDATVGEV IVDGINVKDY PLKKLRDKIG VVPQKAVLFK
GSIRENMRWG NKNATDEEIM EAINIAQAGE IVAQKKEGLD FLIEQGGKNL SGGQRQRFTI
ARAIVKKPEI LILDDSASAL DFATDAALRK ALRELPWNPT IFIVSQRTSS IQHADKIIVL
DDGEIVGIGK HDELLETCEV YREIYDSQFK KEEK
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