| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0393 |
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| Symbol | |
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| ID | 4808396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 488918 |
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| End bp | 489883 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640105807 |
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| Product | sugar ABC transporter (sugar-binding protein) |
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| Protein accession | YP_001036824 |
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| Protein GI | 125972914 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAT TTTTAGTATT ATTGCTTGCC ATTTCGCTGA TATTTACATT TACAGCATGC
AATTCCGGTT CAGGCTCAGG AAATGGACAG GCAAAAGGCT ATGTAGGCGA TCCTTCGGAT
GAATACTACA TGGTTACTTT CCTTTCCGGT ATTGATTACT GGAAGTACTG CTTTGAAGGT
TTTGAGGATG CAGCTAAAGC AATTGGCGTA ACTGCAAAAT ATACCGGTCA GACAGATACT
GATGTTTCAG GTCAGGTTGC AGTGCTTGAA CAGGTCATTG CTCAAAAACC AAAAGGTATA
GCAGTAACAG CGGTTAATTC AACAGCATTG GCGGATACAA TCAATTCAGC TATTGAACAA
GGTATTTCAG TTGTATGCTT TGACTCTGAC TCTCCTACTT CAAACCGTTC CGCATATCTT
GGAACCGGTA ACTATGCAGC AGGTCAGAAG GCGGCTGAGT TCCTGGTACC GTTGGTAAAC
TACAAAGGTA AAATTGCAGT ATTGTATACA GTTGGTGCAG AAAACAGTGA ATCCCGTGTT
CAGGGTTTTG AAGACTGGTG TAAACAAAAT GCGCCCGAAG TTTCCCTCGT AAAAGTTAAT
GATGCAGGCG ATACAACTGT CGCAGCGGAC AACCTGGCGG CTGCATTACA GGCAAATGAT
GATATTGTTG GTGTATTCTG TGTAGACGGT GTTGCAGGTA CTGCAGGACC GACAGCAGTT
GCAGAATCAA AGAAAGATTT AAGAGTTCTT GCATTTGACG TTGATGTGAC AGTTCTTGAC
AAGGTTAAGA GCGGTGAAAT TGATGGTACA GTTGCACAGG GAATGTATAA CATGGGTTAT
TGGAGCCTGA TGATGCTCTA TACTGAGGCA AACGGTCTTT CGTCCAAAGC TCTTCCGGGC
AATCTTGACA CAGGTGTTGT AATAGTAACA AAAGATAATG TTGATGAGTA CTATCCAAAG
AAATAA
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| Protein sequence | MKRFLVLLLA ISLIFTFTAC NSGSGSGNGQ AKGYVGDPSD EYYMVTFLSG IDYWKYCFEG
FEDAAKAIGV TAKYTGQTDT DVSGQVAVLE QVIAQKPKGI AVTAVNSTAL ADTINSAIEQ
GISVVCFDSD SPTSNRSAYL GTGNYAAGQK AAEFLVPLVN YKGKIAVLYT VGAENSESRV
QGFEDWCKQN APEVSLVKVN DAGDTTVAAD NLAAALQAND DIVGVFCVDG VAGTAGPTAV
AESKKDLRVL AFDVDVTVLD KVKSGEIDGT VAQGMYNMGY WSLMMLYTEA NGLSSKALPG
NLDTGVVIVT KDNVDEYYPK K
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