Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0391 |
Symbol | |
ID | 4808468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 486278 |
End bp | 487777 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640105805 |
Product | ABC transporter related protein |
Protein accession | YP_001036822 |
Protein GI | 125972912 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.302991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATG CTTTACTTCT GGAAGTTAAA GGGCTTTCAA AAGTATTCCC TGGAACACGT GCACTAAATC GTGTCAGCCT TGAAGTAAGA AAAGGTGAAG TACATGGTTT GTGCGGAGAA AACGGTGCAG GGAAAAGCAC TTTAATGAAC ATTGTAGGTG GAGTTTTTCC TGCAACTGAA GGAATTATGA AATTCGACGG CAAAATTTTC AATCCCAAAA ACCCTAAGGA CTCTCAGGAT GCAGGAATAG GTTTTGTTCA TCAAGAGCTT TGTTTGTGTC CGCATCTTTC GGCAGCTGAA AACATTTTTA TTGGAAGGCT GCCAAGCAAA GGGGATAAAA TTGACTTTAA AAAGCTTTAT GAAGATGCCG ATGCGATACT TAAAACTTTA GATGCCAATT TCAGCAGCAA AACTCTTGTT AGTAATTTAA CGGTCAGTGA ACAGCAACTT GTGGAAATAG CAAAATCTAT TTCACTTAAT TGTAAGCTCC TAATTTTAGA TGAGCCTACC AGTTCCCTGA CTGACAAAGA GACAGCAAGA CTGTTCCAAG TGGTCAGAGA CCTCAAGAAG AAAGGTATAT CCATACTGTT TATATCTCAC CGTATGAAAG AAGTGTTCGA AATATGTGAC CGGGTTACAG TTCTAAAAGA TGGTTCGTAT GTTTGCTGTA TGAATATTTC GGAAATTACA CATGAAGATG TAATAAGAGC GATGGTAGGG CGTGACCTTG GCGAGCTTTA CCCGCCTAAA TCTTCAAAAA TTGAGGAAGA CAACTATATT TTAAAGGTTG AAAATTTAAG CGGAAATGGA TTTGAAAATG TAAGCTTTAC ATTGAAAAAA GGAGAAATCT TAGGTTTCGC AGGCTTGGTA GGAGCAGGTC GCAGTGAGGT CATGAGAGGA TTGTGTGCAA TAGATCCCGT TAAACGTGGA GAGGTTTATC TAAATGGTGA AAAACAAAAG TTTAAACGGT ACAAGGACGC AGTAAAAAAA GGAATTTGCT ATCTTACAGA AGACAGAAAA AATTCGGGTT TGTTTTTGCA CATGAGCATA GCCCAAAATA TCAGCAGTGC AAACCTTGAA GCTGTTTCAA AACGTGGTTG GATTATAAAG AAACGAGAGT ACAGCTTGTC TGAAAAATAT GTGAAGGCAT TGTCAATAAA GATTCCGGGT TTGTCATATC CTATCAGTAA TTTGTCCGGC GGCAACCAAC AGAAATGCCT GATCGGAAAA TGGCTTTCAA CAAATCCCAA AGTCATAATT ATGGATGAAC CTACACGAGG CATTGACGTC GGGGCAAAAC GTGAAATCCA TAATCTGTTG CGTTCATTAA GTGAGCAAGG CGTTGGTGTG ATAATTGTCT CCAGTGAACT GCCTGAAATA ATCGGTGTTG CTGACAGAAT TGCGGTGATG CATGAAGGGA GGCTGGCAGG ATTTTTACAG GGAGAACAAG TTTCTGAGGA AAACATAATG AAATTGGCTT CCGGAGCAAA TTTATCATAG
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Protein sequence | MDNALLLEVK GLSKVFPGTR ALNRVSLEVR KGEVHGLCGE NGAGKSTLMN IVGGVFPATE GIMKFDGKIF NPKNPKDSQD AGIGFVHQEL CLCPHLSAAE NIFIGRLPSK GDKIDFKKLY EDADAILKTL DANFSSKTLV SNLTVSEQQL VEIAKSISLN CKLLILDEPT SSLTDKETAR LFQVVRDLKK KGISILFISH RMKEVFEICD RVTVLKDGSY VCCMNISEIT HEDVIRAMVG RDLGELYPPK SSKIEEDNYI LKVENLSGNG FENVSFTLKK GEILGFAGLV GAGRSEVMRG LCAIDPVKRG EVYLNGEKQK FKRYKDAVKK GICYLTEDRK NSGLFLHMSI AQNISSANLE AVSKRGWIIK KREYSLSEKY VKALSIKIPG LSYPISNLSG GNQQKCLIGK WLSTNPKVII MDEPTRGIDV GAKREIHNLL RSLSEQGVGV IIVSSELPEI IGVADRIAVM HEGRLAGFLQ GEQVSEENIM KLASGANLS
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