Gene Cthe_0355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0355 
Symbol 
ID4808432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp445334 
End bp446512 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content42% 
IMG OID640105769 
Producthypothetical protein 
Protein accessionYP_001036786 
Protein GI125972876 
COG category[S] Function unknown 
COG ID[COG1379] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00375] conserved hypothetical protein TIGR00375 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAT ATTTTGTGGA CCTTCATGTG CATATCGGAA GGTCTTCAAA AGGAAAAGAG 
GTAAAGAAAG CCACTGCCAA CAATCTTACT TTTGAAAATA TAGCATTTGA ATCCTACACC
AGAAAAGGCA TAGATGTTAT TGGTGTAGTT GACTGTTTGT CTCCATATGT CATTGAAGAT
ATTGAAGAGC TTGTGGACAG AGGAGAGCTC ATAGAAAAAC AGGGCGGGGG AATGGAGTAT
AGAAAGGGAC AGATATTGAT ATTGGGAGCT GAGCTTGAAA CACATGAAGA AAAAGGCGGA
AGCTCCCATT CGCTTTGCTT TTTTCCCACA TTAAAGTCAA TCAAAGACTT TGCCAAAGCC
ATGGAGAATC ACATAAAAAA CATCTATAAC TGTTCCTATA TGTGCAGATT AACAGCCCGT
CAGCTTATAG ATATAGTTGA CTTTTACGGC GGCACCTTTA TTCCGGCCCA TGTTTTCACT
CCCTATAAAA GTTTTTATGG CAATTGCTGC GACAGTCTTT TTGAAATATT TGACGAGAAA
TCCTTTGATA AGATTCCTGC AGTGGAACTG GGGCTTAGTG CGGATTCAAT GATGGCATCG
CAGCTTGGCG AGCTTGACGA AAAAGCCTTT CTCAGTAACT CCGATGCCCA CTCCCTGTCG
AAGATGGGCA GAGAATATAA TATATTTGAA ATGGAAGAAG CAAATTACGA AGAAATATTA
AAAGCTTTTA AAGGAATCGA CGGAAGAAAA ATAAAGGCAA ATTTCGGACT GGATCCCAAG
CTTGGAAAAT ATCACAGGAC TTATTGCCTT GTTTGCGACT CGGTAATAAA AGAGGATCCG
CCGGTGCTAA AATGTCCTGT TTCCGACAAA CACCGTGTGG TGGTGGGCGT AAAGGACAGA
CTGATGATGA TAAGAGACAG GGAAAATCCG CTGATGGATT CAAGGCCGCC CTATTTTTAT
CAGGTTCCCT TGGAGTTCCT TCCCAAAGTG GGCCCTAAAA CCATAGACAA GCTTATAGAG
TTTTTCGGAA GCGAGATGAG AGTATTGCAT TATGCTTCTT ATGAGGAATT GACAAAAGTA
GTGAGCGAGG ATATAGCAAA AAATATTGTG CTGTCAAGAG AAGGAAAGCT TTCCATTGAG
GCCGGCGGTG GTGGAGTATA CGGAAAAATA GAGGCGTGA
 
Protein sequence
MKEYFVDLHV HIGRSSKGKE VKKATANNLT FENIAFESYT RKGIDVIGVV DCLSPYVIED 
IEELVDRGEL IEKQGGGMEY RKGQILILGA ELETHEEKGG SSHSLCFFPT LKSIKDFAKA
MENHIKNIYN CSYMCRLTAR QLIDIVDFYG GTFIPAHVFT PYKSFYGNCC DSLFEIFDEK
SFDKIPAVEL GLSADSMMAS QLGELDEKAF LSNSDAHSLS KMGREYNIFE MEEANYEEIL
KAFKGIDGRK IKANFGLDPK LGKYHRTYCL VCDSVIKEDP PVLKCPVSDK HRVVVGVKDR
LMMIRDRENP LMDSRPPYFY QVPLEFLPKV GPKTIDKLIE FFGSEMRVLH YASYEELTKV
VSEDIAKNIV LSREGKLSIE AGGGGVYGKI EA