Gene Cthe_0337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0337 
Symbol 
ID4808486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp425993 
End bp426703 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content41% 
IMG OID640105751 
ProductPHP-like protein 
Protein accessionYP_001036768 
Protein GI125972858 
COG category[S] Function unknown 
COG ID[COG1379] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.268427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGTGT ACACAGACCT TCATATTCAT TCTGCATTAT CTCCGTGCTC CGATAATGAG 
ATGACACCCA ACAATATTGT CAACATGGCC TTTCTCAAAC AGCTTGACAT TATTGCGGTG 
ACCGATCACA ATTCTGCCGA AAACTGTGTT GCAGTGGTCG AGTGTGCCAA AAAGAGAGGG 
ATTGTTGCGG TTCCCGGAAT GGAGCTTGAA ACCAGGGAAG AGGTTCACCT TGTATGCCTT 
TTTCCGGGTA TTGATGAGGC GCTTGACATG CAGAAGATAG TATATAATGC ACTCCCGGAC 
ATAAAAAATC GGGAAGACAT ATTTGGAGAG CAAATTGTAA TGGATGCCGG GGATAATGTT 
TTAAGGCATG TGGACAGACT TCTTTTGACT GCATCAAATC TTAGCGTTGA AGATGTGTTC 
AGCCATGTTG CGGCATTGGG AGGTGTTGTT ATACCTGCCC ATGTGGACCG AGATTCTTAC 
AGTATTATTT CAAATCTTGG AATCATTCCT GAAAATCCTG AAATAAAATA TCTCGAAATC 
TCAAAATTCT GCGACAAAAC GAAATATCTT GAGAAAAACC CCCATCTTGG AAGATTTAAT 
TTTATCAGAT CTTCTGATGC CCATTCATTG GGCGACATTC TGGAAAGGGA AAATTCTATT 
GAACTTGAGG AAATAAGCAT AGAATGCCTT ATTGAGACGT TAAAAAAGTG A
 
Protein sequence
MIVYTDLHIH SALSPCSDNE MTPNNIVNMA FLKQLDIIAV TDHNSAENCV AVVECAKKRG 
IVAVPGMELE TREEVHLVCL FPGIDEALDM QKIVYNALPD IKNREDIFGE QIVMDAGDNV 
LRHVDRLLLT ASNLSVEDVF SHVAALGGVV IPAHVDRDSY SIISNLGIIP ENPEIKYLEI 
SKFCDKTKYL EKNPHLGRFN FIRSSDAHSL GDILERENSI ELEEISIECL IETLKK