| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0311 |
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| Symbol | |
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| ID | 4808529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 389538 |
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| End bp | 392366 |
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| Gene Length | 2829 bp |
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| Protein Length | 942 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640105722 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_001036742 |
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| Protein GI | 125972832 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00463978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG ATTATATTGT TGTAAAGGGT GCCAGAGAGC ACAATTTGAA AAACATAGAT
GTCAAGATTC CCAGGGACAA GTTTGTTGTT ATCACCGGAC TGAGCGGATC AGGCAAATCA
TCCCTTGCTT TTGACACAAT ATATGCGGAG GGACAAAGGC GCTACGTTGA GTCATTGTCC
TCGTATGCAA GACAGTTTTT AGGACAAATG GAAAAACCTG ATGTCGATTA TATTGACGGA
CTGTCGCCGG CCATAGCGAT AGATCAGAAA ACCACAAGCC GCAATCCCCG TTCCACTGTG
GGCACGGTTA CGGAGATATA TGATTATTTA AGGCTTCTTT TTGCAAGAAT AGGCACTCCC
CACTGCTACT TATGCGGAAG GGAAATTTCC CAGCAAACGG TGGACCAGAT GGTGGACAGA
ATTATGGAGT TTGAAGAAGG CACACGGATT CAGCTTCTTG CTCCTGTGGT AAGAGGAAGA
AAAGGTGAGT ATCACAAGCT CATAGAAGAT ATAAAGAAGG AAGGCTATGT CAGGATTAGA
GTGGATGGAG AGGTAGTGGA TGTAAATGAC CCTGTAAACC TCGACAAGAA CAAGAAGCAC
AATATTGAAA TTGTGGTGGA CAGGCTGATT GTGAGACCGG GAATTCAGAA AAGGTTGACA
GATTCCATTG AGACTGTTCT GCGCTTAAGC AACGGCATAC TTGTGGTTGA TGTCATAGGC
GGAAAGGAGA TGCTCCTAAG CCAAAACTTT GCATGTACCG AATGTAACGT GAGCATGGAG
GAAATAACGC CCAGAATGTT TTCTTTCAAC AATCCTTACG GTGCCTGTCC CGAATGTACT
GGTCTGGGCT CTCTTATGAG GATAGACCCT GACCTTGTCA TACCGGACAA AAAACTTTCT
CTGGCCCAGG GAGCCGTCAG GGCGTCAGGA TGGAATATAG CAAATGATGA AAGCTATGCC
AGAATGTATA TAGACGCTCT TGCAAAACAT TATAATTTCA GCGTGGATAC CCCTGTTGAG
GAGCTTCCCC CGCATATTCT TGACATTATA CTCTATGGCA CCAACGGGGA AAAAATTAAA
ATAGAATATG AAAGGGAAAA TGAAAAAGGA ACATTCATGG CAAGCTTCCC GGGAATTATA
AACAGTATGG AGAGAAGATA CAAAGAGACA ACTTCGGAAG TAATGAAGCA GTACTATGAA
AACTTTATGA GCAATATACC CTGTCCTGTC TGCAAGGGGG CGAGATTGAA AAAGGAAAGT
CTTGCAGTGA CAATAGGCGG CAAAAATATA TATGAAGTTT GCTGCTTGTC CATTGGAGAA
GCAAAAGAGT TTTTCGCAAA TTTAAACCTT ACGGAAAGGC AGCAGCTTAT TGCCCGCCAG
ATCTTGAAGG AAATAAATGC AAGACTGGGA TTTTTGGTGG ATGTGGGGCT TGACTACCTC
ACCCTTGCGA GAGCGGCAGG AACACTGTCC GGAGGTGAAG CCCAGAGAAT CAGGCTTGCC
ACACAAATTG GCTCGGGACT TATGGGAGTT ATATATATCC TGGACGAGCC CAGCATAGGT
CTTCATCAGA GGGATAACGA CAGGCTCCTC AGAAGTCTCA AGAAGCTAAG GGATTTGGGA
AATACTTTGC TGGTGGTTGA ACATGATGAG GATACAATGT ATGCGTCGGA TTACATTATT
GATTTGGGAC CGGGTGCGGG AAGCCACGGA GGACAAATAG TTGCGGAAGG TACTGTGGAA
GAGATTAAAC AAAATCCCAA TTCCGTTACG GGAGAGTATC TTAGCGGCAG AAAGAAAATT
GAAGTTCCTA AAGAAAGAAG AAAACCCAAT GGGAAATGGC TGGAAATTAT AGGAGCAAGA
GAAAATAATC TTAAAAATAT AAATGTAAGA ATACCTTTAG GAGTGTTTAC GTGCATTACA
GGGGTTTCAG GATCCGGGAA GAGTTCTCTG ATAAATGAAA TTTTGTACAA GCGATTGGCC
GCCGAGCTTA ACAGAGCAAG TGTAAAACCG GGCGAGCATG ACTTGATAAA AGGAATTGAG
TATCTTGACA AAGTTATAGA TATCGACCAG TCGCCCATTG GCCGCACGCC AAGGTCCAAC
CCTGCAACAT ACACAGGTGT GTTTGATTTT ATAAGGGAAA TATTTGCAAA CACCACTGAA
GCAAAAACCC GGGGGTACAA GGCGGGACGT TTCAGTTTTA ATGTAAAGGG CGGCAGATGC
GAAGCCTGTG CCGGTGACGG TATAAACAAA ATTGAAATGC ACTTTTTACC GGACATTTAT
GTTCCCTGTG AGGTTTGCAA GGGCAAGCGC TACAACAGAG AGACCCTTGA AGTAAGATAC
AAAGGAAAAA ATATAGCGGA AGTTCTGGAT ATGACTGTGG AAGAGGCATT GGAGTTCTTT
AAGAATATAC CAAGGATACA CAAAAAGATA GAAACATTGT ATGATGTGGG TCTTGGTTAT
ATCAAACTGG GACAGTCGTC CACCACTCTG TCCGGAGGCG AGGCTCAGAG GGTAAAACTT
GCCACCGAGC TTTCGAGAAA GAGCACTGGA AAAACAATGT ATATACTGGA TGAGCCGACT
ACAGGCCTTC ATATGGCTGA TGTGCACAGG CTTGTCGGCA TACTTCACAG ACTGGTGGAG
GCGGGAAATT CTGTAGTGGT TATTGAACAT AACCTTGACG TAATAAAAAC TGCCGATTAT
ATTATTGATT TGGGACCTGA AGGTGGCAGC GGAGGAGGTC TCGTTGTTGC CGAGGGGACA
CCGGAAGAAG TGGCAAAGGT TGAAAATTCT TATACAGGAC AGTTTTTGAA AAAAGTTTTG
TCCACTTAA
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| Protein sequence | MKKDYIVVKG AREHNLKNID VKIPRDKFVV ITGLSGSGKS SLAFDTIYAE GQRRYVESLS
SYARQFLGQM EKPDVDYIDG LSPAIAIDQK TTSRNPRSTV GTVTEIYDYL RLLFARIGTP
HCYLCGREIS QQTVDQMVDR IMEFEEGTRI QLLAPVVRGR KGEYHKLIED IKKEGYVRIR
VDGEVVDVND PVNLDKNKKH NIEIVVDRLI VRPGIQKRLT DSIETVLRLS NGILVVDVIG
GKEMLLSQNF ACTECNVSME EITPRMFSFN NPYGACPECT GLGSLMRIDP DLVIPDKKLS
LAQGAVRASG WNIANDESYA RMYIDALAKH YNFSVDTPVE ELPPHILDII LYGTNGEKIK
IEYERENEKG TFMASFPGII NSMERRYKET TSEVMKQYYE NFMSNIPCPV CKGARLKKES
LAVTIGGKNI YEVCCLSIGE AKEFFANLNL TERQQLIARQ ILKEINARLG FLVDVGLDYL
TLARAAGTLS GGEAQRIRLA TQIGSGLMGV IYILDEPSIG LHQRDNDRLL RSLKKLRDLG
NTLLVVEHDE DTMYASDYII DLGPGAGSHG GQIVAEGTVE EIKQNPNSVT GEYLSGRKKI
EVPKERRKPN GKWLEIIGAR ENNLKNINVR IPLGVFTCIT GVSGSGKSSL INEILYKRLA
AELNRASVKP GEHDLIKGIE YLDKVIDIDQ SPIGRTPRSN PATYTGVFDF IREIFANTTE
AKTRGYKAGR FSFNVKGGRC EACAGDGINK IEMHFLPDIY VPCEVCKGKR YNRETLEVRY
KGKNIAEVLD MTVEEALEFF KNIPRIHKKI ETLYDVGLGY IKLGQSSTTL SGGEAQRVKL
ATELSRKSTG KTMYILDEPT TGLHMADVHR LVGILHRLVE AGNSVVVIEH NLDVIKTADY
IIDLGPEGGS GGGLVVAEGT PEEVAKVENS YTGQFLKKVL ST
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