Gene Cthe_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0310 
Symbol 
ID4808528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp388027 
End bp389073 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content44% 
IMG OID640105721 
Producthypothetical protein 
Protein accessionYP_001036741 
Protein GI125972831 
COG category[S] Function unknown 
COG ID[COG3584] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATA CAATAGGTAA TATTTTTAAC TGCCCGGATC TCAACAGAGT TCATAGCCGC 
AGCCGGGAAT ACCTGTCTGA GTATTTCCAG GAAGAGGAAA TCAACAGTCT GAATTATCCC
GAAATTCTCG AAGAAGTTCT CATGAATGCA GCACAACTGA AATTAAACTA TCCGGAAATA
CTTGAAGAAA TAATAAGGAA AGTTGATTCA GCCGTTTTAT CCTCCAAATC ACCTTCCATT
TTGGAGCGGG TCAAATGCTG CAGCCAATCA ATTCTTAGTA AAAAGGATTT GGATTTGAAA
GTCGTGGCTG CAGGATCATT GATGACCTTC CTGCTTACCT GCGCCGGTAA CAACATTCTC
AATTCAATCA CAGAAAAAAC AGCCAGCCAT GTGCACAATT TCGCAAGTTC CACCTGGGTA
TCCCCAGACA GTGCAAAATT GTCAAGCCTC GTCAAAGAAA GTATGCCGGC AAAAACCGAA
GGAGCCCTGG CTTCTGTTTC AGCTGTGAAT ACCGCGAACA TTTCCTTTGC TGAAATTAAA
AAAAGCATAG AAAGCAAAAA TACTTCAAAA ACCCAAAGCA CACCTGTTTC GAGGTCGAAA
CTGACCGCCA AATCAAATTC TGCAACTGAG GCAAAGTCTG CCCAAACCCA AGTCAAACGC
ACAAAGGTGG AAATTGCGGA CATCATGCCC CAGTGCAAAA GGATAATCAA TATGACGGCT
ACGGCATATG ACCTCTCATA TAAAAGCTGC GGCAAAACCC GTGAACATCC TGCGTATGGA
ATTACAGCCT TCGGAACACG CGCCACAGTC GGAAGAACGG TTGCCGTGGA TCCGTCCGTC
ATTCCTCTCG GAACCAGGGT GTACATATCT TTTCCCGTGG CATACAGCCA TCTTGACGGA
ATATACATAG CCGAAGATAC CGGAAGCCTA ATCAAGGGCA ATAAAATAGA TATTTTCTTT
GGCGAAGACA AACCGGGCGA AACGGTAATA TACAACAAAG CCATGAAATT TGGATTGCAG
GAAGTAGTGG TATACGTGCT GGACTAA
 
Protein sequence
MGNTIGNIFN CPDLNRVHSR SREYLSEYFQ EEEINSLNYP EILEEVLMNA AQLKLNYPEI 
LEEIIRKVDS AVLSSKSPSI LERVKCCSQS ILSKKDLDLK VVAAGSLMTF LLTCAGNNIL
NSITEKTASH VHNFASSTWV SPDSAKLSSL VKESMPAKTE GALASVSAVN TANISFAEIK
KSIESKNTSK TQSTPVSRSK LTAKSNSATE AKSAQTQVKR TKVEIADIMP QCKRIINMTA
TAYDLSYKSC GKTREHPAYG ITAFGTRATV GRTVAVDPSV IPLGTRVYIS FPVAYSHLDG
IYIAEDTGSL IKGNKIDIFF GEDKPGETVI YNKAMKFGLQ EVVVYVLD