| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0309 |
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| Symbol | |
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| ID | 4808527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 386019 |
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| End bp | 388001 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640105720 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001036740 |
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| Protein GI | 125972830 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00254602 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAAT TTAAACTGGT GTCTGATTAC AAACCCTGCG GAGATCAACC GGAGGCTATA
GATAAACTTG TGGAAGGCAT TAACAGGGGA TACAGGGGTC AGACTCTTTT GGGTGTGACC
GGTTCCGGTA AAACATTTAC CATGGCCAAT GTTATTGAAA GGGTTCAGAA ACCCACCCTT
GTGATTGCCC ACAACAAGAC TCTTGCGGCA CAGCTTTGCA GTGAGTTTAA GGAGTTTTTT
CCCAACAACT GTGTTGAATA TTTTGTAAGC TATTATGACT ATTACCAGCC GGAGGCTTAT
ATTCCCGCCA CCGATACCTA TATTGAGAAG GATTCGTCGA TAAATGACGA GATTGACAAG
CTGAGGCACT CGGCTACTGC TGCGCTGTTT GAACGAAGGG ACGTTATAAT AGTTGCAAGC
GTTTCGTGTA TTTACGGTTT GGGAGACCCG GAAGATTATA CTGATTTGAT GCTTTCGTTG
CGTCCCGGCA TGATAAAGGA CAGGGATGAA ATAATCAGGA AGCTGGTGGA CATTCAGTAC
GAAAGAAATG AAATTGATTT TAAAAGAGGA AAATTCAGGG TCAGGGGTGA CATACTGGAG
ATATTCCCGG CTTCATCTTC TGACAAAGTG ATACGGGTGG AGTTTTTCGG AGAAGAAATT
GATAGGATTA CCGAAGTTGA TTCACTGACC GGTGAAATAA CCGGAGTATG CTCTCATGTT
GCCATTTTTC CGGCTTCCCA CTATGCCACG ACAAAGGCTA AAATGCAAAG GGCCATAGCT
TCAATTGAAC AGGAGCTTGA GGAGCGTGTC AGGGAATTAA AATCCCAGGG AAAACTCCTT
GAAGCCCAGA GGCTTGAACA GCGGACAAGG TATGACCTTG AAATGATGCA GGAAATAGGG
TTTTGCCAAG GTATAGAGAA TTATTCGAGA CATATAAGCG GAAGAGCTCC GGGCAGTCCG
CCTTTTACGC TTATTGATTA CTTCCCGAAG GATTTTTTGC TGATAATTGA CGAGTCCCAT
GTGACCATTC CCCAGATTGG AGCCATGTAC AACGGTGACC GGTCGAGAAA GGAATCCCTT
GTGGAATACG GTTTCAGGCT CCCTTCGGCT TTTGACAACA GACCGCTTAC GTTTGAGGAG
TTTGAGAAAA AAATCAACCA GGTTATATTT GTCAGTGCTA CGCCGGCAAA GTATGAAAGG
GAGCATTCGC AGCAGATAGT GGAGCAGATT ATAAGGCCTA CAGGGTTGCT TGATCCTGAG
ATTGTTGTGA AACCTGTAAA AGGTCAGATT GACGACCTGA TTGGGGAAAT AAGTGAAAGA
GTACAGAAAA ATCAGAGAGT TATGATTACC ACCCTTACCA AAAAGATGGC GGAGGATTTG
ACGGATTATT TGAGGGAGCT TGACTTTAAA GTTGAATATT TGCATTCTGA CATTGATACC
ATTGAGAGAA TGGAAATAAT ACGAAACTTA AGACTTGGAG TTTTTGACGT CCTGGTTGGC
ATAAATTTGC TAAGAGAAGG TCTGGATATT CCGGAAGTGT CCCTTGTGGC CATTCTGGAT
GCCGACAAGG AAGGCTTCCT GCGTTCGGAG ACCTCATTGA TTCAGACTAT AGGAAGAGCG
GCCAGAAATG TTGAGGGAAA AGTCATAATG TATGCCGATA CCATTACGGA CTCGATGAGA
AGAGCCATTG ACGAGACCAA CAGAAGAAGA AAGATACAGT CGGAATACAA TCAGAAGCAC
GGTATAACGC CGAAGAGCGT TCAAAAGGGT ATAAGGGATG TAATTGAAAT TACAAAAGTT
GCTGAAGAAG ATGCAAAGTA CTTTATTCGC GGCGACGAGG ATTCGATGGA TAAGGATGAA
GTTTTGGACC TTATTGAAAA ACTCACCAAT GAAATGAAGG CGGCAGCGGC GGAACTTCAA
TTTGAACGGG CTGCGGAGCT CAGGGACAAA ATTGCCGAAC TGAAAAAGAA AATAGGAGCT
TAA
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| Protein sequence | MHKFKLVSDY KPCGDQPEAI DKLVEGINRG YRGQTLLGVT GSGKTFTMAN VIERVQKPTL
VIAHNKTLAA QLCSEFKEFF PNNCVEYFVS YYDYYQPEAY IPATDTYIEK DSSINDEIDK
LRHSATAALF ERRDVIIVAS VSCIYGLGDP EDYTDLMLSL RPGMIKDRDE IIRKLVDIQY
ERNEIDFKRG KFRVRGDILE IFPASSSDKV IRVEFFGEEI DRITEVDSLT GEITGVCSHV
AIFPASHYAT TKAKMQRAIA SIEQELEERV RELKSQGKLL EAQRLEQRTR YDLEMMQEIG
FCQGIENYSR HISGRAPGSP PFTLIDYFPK DFLLIIDESH VTIPQIGAMY NGDRSRKESL
VEYGFRLPSA FDNRPLTFEE FEKKINQVIF VSATPAKYER EHSQQIVEQI IRPTGLLDPE
IVVKPVKGQI DDLIGEISER VQKNQRVMIT TLTKKMAEDL TDYLRELDFK VEYLHSDIDT
IERMEIIRNL RLGVFDVLVG INLLREGLDI PEVSLVAILD ADKEGFLRSE TSLIQTIGRA
ARNVEGKVIM YADTITDSMR RAIDETNRRR KIQSEYNQKH GITPKSVQKG IRDVIEITKV
AEEDAKYFIR GDEDSMDKDE VLDLIEKLTN EMKAAAAELQ FERAAELRDK IAELKKKIGA
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