| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0300 |
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| Symbol | |
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| ID | 4808518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 376196 |
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| End bp | 376813 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640105711 |
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| Product | Allergen V5/Tpx-1 related |
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| Protein accession | YP_001036731 |
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| Protein GI | 125972821 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | [TIGR02899] spore coat assembly protein SafA
[TIGR02909] uncharacterized protein, YkwD family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.022059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGAA AAAACATATT GGTATTGCTT TTGTTGTTAA TATCAATATT TACAACAAGC
ACTGTTTTTG CACAAACACA GGTTTACACC GTCAAGCCGG GAGACACTAT GTGGAAAATT
GCTGTAAAAT ATCAAATAGG CATCAGCGAA ATAATTGCAG CAAATCCGCA AATTAAAAAC
CCTAACCTCA TTTATCCCGG ACAGAAAATT AATATTCCGA ACATTGATGA TATAAAGGCG
CAGGAAAATG AAGTTATAAG GCTTGTAAAT GTGGAAAGGG CAAAAAAAGG GCTTCCGGCG
TTAAAGGCAA ATTGGCAGCT TTCAAGAGTG GCAAGATACA AATCCGAGGA CATGGCTAAC
AAAGGCTATT TTTCCCACAC TTCCCCCACT TACGGTTCTC CTTTTAAAAT GATGGAAGAC
TTTGGAATAA AATTTACTGC CGCTGGCGAA AACATTGCCA TGGGACAGCA AACAGCCAGA
GATGTTATGA ATGCCTGGAT GAATTCTCCC GGTCATAGAA ACAATATATT AAGTCCTTCT
TTCACAAAAA TTGGAGTCGG CCTTGCAAAA GGACCAAACG GAAGGCTTTA CTGGACTCAA
ATGTTTATAA AAAAATAA
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| Protein sequence | MKRKNILVLL LLLISIFTTS TVFAQTQVYT VKPGDTMWKI AVKYQIGISE IIAANPQIKN
PNLIYPGQKI NIPNIDDIKA QENEVIRLVN VERAKKGLPA LKANWQLSRV ARYKSEDMAN
KGYFSHTSPT YGSPFKMMED FGIKFTAAGE NIAMGQQTAR DVMNAWMNSP GHRNNILSPS
FTKIGVGLAK GPNGRLYWTQ MFIKK
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