| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0289 |
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| Symbol | |
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| ID | 4808507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 359967 |
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| End bp | 362324 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640105701 |
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| Product | DEAD_2 |
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| Protein accession | YP_001036721 |
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| Protein GI | 125972811 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00121679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAT ATAAAAAGGA AATAAAGATA TCGGTAAGGA ATCTGGTTGA GTTTGTGTTA
AGGACCGGTG ACATTGACAG CTCTTTTACC GGAAGCAGCA GGGCCGTCGA AGGTACAAGG
CTTCATAAAA AAATACAGAA AACCCAGGGC AAGGAGTATA GCCCGGAAGT GTTTCTGAAA
ACCACTGTTG AGTTTGACGA CTTTTTCCTC ACAGTTGAAG GACGGGCGGA CGGTGTAATA
AATGAGGACG GCTGTTTTAT AATTGATGAG ATAAAAACAA CAACGGCACC TTTGGAGTTG
ATAGATGAAT TCTACAATCC CCTGCACTGG GCACAGGCCA AATGCTACGC ATATATCCAT
GCGTTAAATG AAAATTTGGA GAAAATAAAG ATAAGGCTTA CCTATTGCCA TTTGGAAACA
GAAGAGATAA AATACCTGGT CAGTGAATTC GATTTTGCAG AGCTTAGCCG GTTTTTCGAG
GAACTTGTTG AAAAATATTA TGTATGGGCA AAGCTTGCCT GTGACTGGCA GGTTAAAAGG
GACTGTTCGA TTAAAGTTCT TGAGTTTCCT TTTGAGAAAT ACAGAAAAGG TCAGAGAAAA
CTTGCTGTGG CTGTTTACAA GACCGTTACG GAGGGTAAAA AACTTTATGT GAAGGCGCCC
ACAGGTATTG GAAAGACCAT TTCAACCCTG TTTCCGGCAG TCAAGGCAAT AGGGGAGGGA
CATGCCTCAA AAATTTTTTA CCTTACGGCA AAGACCGTTA CAGGCGGTGT CGCCAAAGAA
GCTTTTGCAA AAATGAGGCA AAAGGGACTT TTATTTAAAA CGGTGACTCT CACTGCAAAG
GAAAAAATAT GTTTTATGGA AAAAGCCGTA TGCAAACCGG AAAAATGCGA GTATGCCAAG
GGGCATTTTG ACAGAGTGAA CGAGGCAATA ATGGATATAC TGACCAATGA GGATGAAATC
AAAAGAGAAG TTATAGAAGA GTATGCAAAG GCCCACAGAG TTTGTCCCTT TGAGCTGGCG
CTGGATCTTA CCATTTGGGC CGATGCGGTA ATTTGTGATT ACAATTATGT GTTTGATCCG
AGGGTGTACC TGAAAAGATT TTTCTCCGAT GCGGGCGGTG ACTATATTTT TCTGGTGGAT
GAGGCGCACA ACCTTGTGGA CAGGGCAAGA GAAATGTTTT CGGCGCAGCT TTCGAAAAAG
AGCTTTCTTG AGCTGAAAAA GGCGATGAAA GAGGAAAGTC CCAAAATATC GAAAACACTG
CAAAAGCTTA ACACATTTAT GCTGGGTATG AAAAAACTTT GCGGCGATAA CGACTACTTT
GTAAGCAAGG AGGAGCAAAG TGAAATATAC CTGCTTTTAA GAAGACTTAT CGGTGAATGC
GAAGAATATT TGACGGACAG GGCAAAGAAC GGAATTGAAA ATGAGGATTT GCTGCAGCTT
TATTTTGATG CCCTTATGTA TGTCAGGATA GCCGAGTTTT ATGATGACAG GTATGTTACC
TTTGTGGAAA AATCCGATAA CGATGTTAGA ATAAAGCTTT TTTGTATCGA CCCTTCCCAT
CTTTTAAGCG AAGCTTTAAA AAGAGGAAAG GCAGCGGTTT TCTTTTCGGC CACGTTGCTT
CCTTTGAGTT ATTTCAAGGA AGTTTTGGGA GGAGGGCCGG ATGATTACAC GATGTGTTTG
GATTCACCTT TTGAAGTGAA TAACAGATGC CTCATGATAG CCGACAGAAT ATCCACCCGT
TATCAGGACA GGGGCAAAAG CTGCGATGAG GTGGTGCAGT GCATAAAATC CATCGTTTGT
GCCAAAAAGG GAAATTACAT TGCTTTTTTT CCGTCCTATC AGTATATGAA CATGATTTAT
GAATTGTTTG AAAAGGAATG CGGTGATATT AAGCTTTATG TTCAGTCTTC CTCCATGACG
GAAAAGGAAA GGGAGGATTT TCTTGAGCGT TTTAAAGCGG ACCCTCAGGA GACGGTATTG
GGTTTTTGCG TGCTGGGAGG GATTTTTTCC GAAGGAATTG ATCTTAGGGA CGACAGGCTG
ATAGGGGCGA TTATTGTTGG TGTAGGTCTT CCCCAGATAT GTATTGAAAG AGATATCATA
AGGGATTATT ATCAGAATAA AAACCGGCTC GGATTTGAAT ACTCTTACAT GTATCCCGGC
ATGAACAAGG TTATGCAGGC GGCGGGAAGA GTTATAAGGT CGGAGAATGA CAAGGGGGTT
ATACTTTTAA TTGATGACAG GTTTACAAAC CCAAGTTATC TTGCCCTTTT TCCAAATGAG
TGGTTCCCAT ATATCAGAGT TACGGGGAAT AATATATCAG AGCATGTAAA GAAGTTTTGG
AGCCGACATG GGGCTTGA
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| Protein sequence | MNEYKKEIKI SVRNLVEFVL RTGDIDSSFT GSSRAVEGTR LHKKIQKTQG KEYSPEVFLK
TTVEFDDFFL TVEGRADGVI NEDGCFIIDE IKTTTAPLEL IDEFYNPLHW AQAKCYAYIH
ALNENLEKIK IRLTYCHLET EEIKYLVSEF DFAELSRFFE ELVEKYYVWA KLACDWQVKR
DCSIKVLEFP FEKYRKGQRK LAVAVYKTVT EGKKLYVKAP TGIGKTISTL FPAVKAIGEG
HASKIFYLTA KTVTGGVAKE AFAKMRQKGL LFKTVTLTAK EKICFMEKAV CKPEKCEYAK
GHFDRVNEAI MDILTNEDEI KREVIEEYAK AHRVCPFELA LDLTIWADAV ICDYNYVFDP
RVYLKRFFSD AGGDYIFLVD EAHNLVDRAR EMFSAQLSKK SFLELKKAMK EESPKISKTL
QKLNTFMLGM KKLCGDNDYF VSKEEQSEIY LLLRRLIGEC EEYLTDRAKN GIENEDLLQL
YFDALMYVRI AEFYDDRYVT FVEKSDNDVR IKLFCIDPSH LLSEALKRGK AAVFFSATLL
PLSYFKEVLG GGPDDYTMCL DSPFEVNNRC LMIADRISTR YQDRGKSCDE VVQCIKSIVC
AKKGNYIAFF PSYQYMNMIY ELFEKECGDI KLYVQSSSMT EKEREDFLER FKADPQETVL
GFCVLGGIFS EGIDLRDDRL IGAIIVGVGL PQICIERDII RDYYQNKNRL GFEYSYMYPG
MNKVMQAAGR VIRSENDKGV ILLIDDRFTN PSYLALFPNE WFPYIRVTGN NISEHVKKFW
SRHGA
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