| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0285 |
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| Symbol | |
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| ID | 4808568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 352376 |
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| End bp | 353584 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640105697 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_001036717 |
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| Protein GI | 125972807 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.432651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGA TAAAAATGAA AGTTCCGTTG GTCGAGATGG ACGGAGATGA AATGACCCGA
ATCATATGGA GATTGATAAA GGAAAATCTC TTGGAGCCAT ACATAGAGCT CAATACAGAA
TATTACGATT TGGGGCTTGA AAACAGGGAC AAGACCGAGG ACCAGGTTAC CATTGACGCT
GCCAGGGCTA TTCAGAAATA TGGTGTTGGA GTAAAGTGCG CGACTATTAC TCCCAATGCT
CAGAGGGTTG AGGAATACAA CTTAAAGAAG ATGTGGAAGA GTCCTAACGG TACAATCAGG
GCGATTCTTG ATGGTACGGT TTTCCGTGCC CCGATAGTTG TAAACAGCAT AAAGCCCTTT
GTTAAAGGAT GGAAAAAACC TATTTCCATT GCAAGGCATG CTTACGGTGA CGTATACAAG
AATGTGGAAT ACTATGTGCC TTCGGCGGGA AAAGCCGAGC TTGTATTTAC GTCTGAAAAC
GGAGAGGTTT CAAGGCAGAC CATTCATGAG TTTGACGGTC CCGGTGTGAT AATGGGTATG
CACAATACCG ACAAATCCAT CAGAAGCTTT GCAAGGGCCT GCTTTAACTA TGCCCTTGAC
ATGAACCAGG ACCTCTGGTT TTCAACCAAG GATACCATTT CGAAGACATA TGACCATAGG
TTTAAAGATA TATTCCAGGA AATCTATGAA AACGAGTACA AGGAAAAATT CGAAGCCAAG
AATTTGCAAT ATTTCTACAC TCTGATAGAC GATGCTGTGG CACGTATTAT AAGATCTGAA
GGCGGCATGG TTTGGGCATG CAAGAATTAT GACGGTGATG TCATGTCCGA TATGGTGGCT
TCTGCCTTTG GAAGTCTTGC AATGATGACG TCAGTTCTGG TTTCACCCGA CGGAAAGTAT
GAGTTTGAAG CAGCACATGG AACTGTTACA AGACATTATT ACAAGCACCT TAAAGGAGAA
GAGACATCCA CCAACTCAAT GGCAACCATA TTTGCATGGA CGGGTGCATT AAAGAAACGC
GGCGAGCTGG ATGGCATAAA AGAGCTTGTT GATTTTGCAA CCAAGCTTGA ACAAGCATCT
GTTCAGACAA TAGAAAATGG TGTAATGACA AAGGATCTTG CTTCGCTTTC AGAAGTTCCG
GAGAAGAAAA TAGTAAATAC TGAGGATTTT CTTAAAGAAA TCAGGAAAAC TTTTGAAGGT
ATGGCATAA
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| Protein sequence | MSKIKMKVPL VEMDGDEMTR IIWRLIKENL LEPYIELNTE YYDLGLENRD KTEDQVTIDA
ARAIQKYGVG VKCATITPNA QRVEEYNLKK MWKSPNGTIR AILDGTVFRA PIVVNSIKPF
VKGWKKPISI ARHAYGDVYK NVEYYVPSAG KAELVFTSEN GEVSRQTIHE FDGPGVIMGM
HNTDKSIRSF ARACFNYALD MNQDLWFSTK DTISKTYDHR FKDIFQEIYE NEYKEKFEAK
NLQYFYTLID DAVARIIRSE GGMVWACKNY DGDVMSDMVA SAFGSLAMMT SVLVSPDGKY
EFEAAHGTVT RHYYKHLKGE ETSTNSMATI FAWTGALKKR GELDGIKELV DFATKLEQAS
VQTIENGVMT KDLASLSEVP EKKIVNTEDF LKEIRKTFEG MA
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