Gene Cthe_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0276 
Symbol 
ID4808559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp343980 
End bp344939 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content42% 
IMG OID640105688 
Product2-hydroxyacid dehydrogenase 
Protein accessionYP_001036708 
Protein GI125972798 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAGA TATGTGTTTT GGATGCCAAA ACTCTGGGAG ATGACGTGGA TCTGACGGTG 
TTTGATAAAT TTGGTCCTGT ACAGGTTTAT GCTGAAACAA AGCCGGAGGA AGTGGTTGAA
AGGATTAAGG ATGTCGATGT CGTTATTACC AACAAAGTTG TGCTGAATAA AGAAAACCTT
GAAAATGCCT CAAAACTCAA ACTGATTTGT GTGGCTGCGA CAGGAACCAA TAACATAGAT
CTTGAATATG CGGCACAAAA GCAAATTGCC GTAACCAATG TGGCGGGATA CTCAACTATG
AGTGTTGTAC AGCATACTTT TGCGATGCTG TTTTATTTGA TGGAGAATTT GCCTTATTAT
GACAGGTATG TAAAGTCGGG AGAATATGCA AAGAGCAATA TTTTTACTCA TCATGAAAGG
CCTTATCATG AATTGGCCGG TAAAACATGG GGTATCATAG GGCTTGGAAC CATTGGAAGA
GCCGTGGCCA ATGCGGCGGA GGCTTTTGGA TGCAGGGTGG TTTACTACTC AACTTCGGGA
AAAAACAATA ATACTCAGTA TGAAAGAGCT GAACTGGAGA AATTGTTGAA AGAGTCTGAC
ATTGTGTCCA TTCATGCGCC GCTCAACAAT AACACAAGGG GCTTGATTGA TTATGAGCGT
TTGCGTATGA TGAAGAAAAG TGCCATAATA TTAAATCTTG GACGCGGAGG CATTATCAGG
GAGGAGGATT TGGCAAGGGC GCTGGATGAA GAATTGATAA GCGGAGCTGC TCTTGACGTT
TTGGAAAAAG AGCCTGTAAA TTGTGACAAT CCTTTACTTG GTGTAAAAAA CAGTGACAGG
CTTTTCATAA CTCCTCATAT TGCGTGGGCC AGCGTTGAAG CAAGAAAAAG ACTTGTTGAT
GAAATAGCAT TGAATATTGA GGCTTTTATT GAGGGAAAAG AGCGCAACAG AGTATGCTGA
 
Protein sequence
MLKICVLDAK TLGDDVDLTV FDKFGPVQVY AETKPEEVVE RIKDVDVVIT NKVVLNKENL 
ENASKLKLIC VAATGTNNID LEYAAQKQIA VTNVAGYSTM SVVQHTFAML FYLMENLPYY
DRYVKSGEYA KSNIFTHHER PYHELAGKTW GIIGLGTIGR AVANAAEAFG CRVVYYSTSG
KNNNTQYERA ELEKLLKESD IVSIHAPLNN NTRGLIDYER LRMMKKSAII LNLGRGGIIR
EEDLARALDE ELISGAALDV LEKEPVNCDN PLLGVKNSDR LFITPHIAWA SVEARKRLVD
EIALNIEAFI EGKERNRVC