| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0273 |
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| Symbol | |
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| ID | 4808556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 337173 |
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| End bp | 338777 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640105685 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_001036705 |
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| Protein GI | 125972795 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.576727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATATG ATGAAAAGAG AAGCAAAACT ATAGCCTTTT TTAATAAACA TTTTTTCAAT
GTTTCATTTG TATTTTTGGT TGGTATATTG GTAATATACA TAATCTATGA AACAGGTCAT
TTTTTTCCAA CATTCCTGTA TATGAGTGCC TTTGCGGCAA TGATGATTAC GGCAAAGTTT
TTCATCAGGC ACAAGGCACT AAAACACTTG CTTGCAGTAT TGTCATATGT GCTGTTTATT
TTTGTTGTGG ATTCGCATTC TTTGCCTTAT CCGTACTATA CCGTAGTCAA CAAATGGAGC
GTTCTTACCA TTTGCTATGT GCTTCTTCTG GAAAATATAC TGTTTCCTCT CATTGCCGGG
CTGTATCCTG CACTTAGAAT ATTCATGCTT ATGCCCGAAG CCAAAGCAGG GTTGTATCCC
ATTGGCAAAG TAATTGGAAC AGCCAACGGC CAAATTTGCT TTACAATTAC ACTTGTCCTC
ATATACCAGT TATTCGGAAA GGTTATTATT GAACGCAACA AATACAAAAA GATGAGTATT
ACAGATTCAC TTACAGGTGT GGCAACCTTT GCCCACACAA TTGAAACTGC CAAAAAAATG
ATCCAAAACG GTAATATTTC AATTCTGATT ACCGATATGG ACCGCTTTAA GCAAATTAAC
GACACTTTCG GTCACGTGGC GGGAAATAAA GTGCTCATAA AAGTTTCGGA GTTTCTCAAA
GAAGAAACCG AAGGTCTTGA AAGAATAATC GGAAGGCTTG GTGGCGACGA GTTTATTATT
GTGGTAAAAA ATGATGGAAA AAACGAAAGA GTAAAAAATT TGGGAGAACA TCTTTCAAAA
GCAATAAGAG AGAAGAAGTT CGTAATTGAC GAGGAACTGG ATCCGATAAA TCTGTCTTTT
TCCGTGGGGC AGGCCAATTC GTCGCCTTCC GACACAGAAA ATGACATAGA AAAGCTTTTG
TATAAAGCAG ATATAAATAT GTATTATAAC AAGTGCAAAA ACCATAGGCT GGACATCTTT
ACAAATAACA AAAAACCTCT CCTTCCAAAG GAAGGATTTG AACTTTTAAA TGTCCTGGCG
GAAAAGGATA TGTACACTTA CGTTCATTCC AGGTACACTG CTCAGTACGC TGCTGCGCTT
GCAAAAGAAG CCGGTCTTCC GGATGAACAG GTTGAACGCA TTTATGCCGC CGGATGGCTC
CATGACATAG GTAAAATTCT TATATCCAGC GACATAATAA GAAAAAGCAC TACTTTAACT
CCCGAAGAAT ATGAGCTTAT CAAGGGACAT GTAAATTATG GACTTAACAT AATTAATAAT
TTATCTCTCC CTGTCGAAAT TATAAATTGC ATAGCATACC ATCACGAAAA CTGGGACGGC
ACAGGATATC CTCACGGACT CGCAGGAGAA AGCATACCTT TTGAAGCAAG AATTCTGCAA
TTGGCAGATT CCTATTCCGC AATGATAACA AGAAGAGTAT ACAGAAAAAC TCTAAGTCCT
GAGGATGCAC TCAATGAAAT TATCTCCGGA TGCGGAAAAC AATTTGATCC CAATCTCGTA
AAAATATTTG TAAAACTGAT ACAAAGCAAA TTTAAAGCAG CTTAG
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| Protein sequence | MQYDEKRSKT IAFFNKHFFN VSFVFLVGIL VIYIIYETGH FFPTFLYMSA FAAMMITAKF
FIRHKALKHL LAVLSYVLFI FVVDSHSLPY PYYTVVNKWS VLTICYVLLL ENILFPLIAG
LYPALRIFML MPEAKAGLYP IGKVIGTANG QICFTITLVL IYQLFGKVII ERNKYKKMSI
TDSLTGVATF AHTIETAKKM IQNGNISILI TDMDRFKQIN DTFGHVAGNK VLIKVSEFLK
EETEGLERII GRLGGDEFII VVKNDGKNER VKNLGEHLSK AIREKKFVID EELDPINLSF
SVGQANSSPS DTENDIEKLL YKADINMYYN KCKNHRLDIF TNNKKPLLPK EGFELLNVLA
EKDMYTYVHS RYTAQYAAAL AKEAGLPDEQ VERIYAAGWL HDIGKILISS DIIRKSTTLT
PEEYELIKGH VNYGLNIINN LSLPVEIINC IAYHHENWDG TGYPHGLAGE SIPFEARILQ
LADSYSAMIT RRVYRKTLSP EDALNEIISG CGKQFDPNLV KIFVKLIQSK FKAA
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