| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0258 |
|---|
| Symbol | |
|---|
| ID | 4808541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 317319 |
|---|
| End bp | 318728 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640105670 |
|---|
| Product | cellulosome enzyme, dockerin type I |
|---|
| Protein accession | YP_001036690 |
|---|
| Protein GI | 125972780 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
|---|
| COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000567445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAGT ATGGGTTAAA AAAGATTGTT TGGATGCTTG GCATTTTATG TTTTCTGGTT
GTGTCTTTAA ATACCTCAAT TTTTGCAGCG GACGGTAAAA ATGTGGTTTT AGGCGATGTC
AACGGAGATT CCAAAATAAA TGCAATTGAC GTTTTGCTTA TGAAAAAATA TATACTCAAA
GTTATAAATG ATTTACCCTC CGACGGTGTG AAAGCAGCGG ATGTAAATGC TGACGGTCAA
ATAAATTCGA TAGATTTTAC ATGGCTGAAA AAATATATGT TAAAAGCTGT TGAGAAATTT
CCCGGAGAAG CAAGCAATAA TCCTGACGCT GTTATTCAGT TTGAATCCGG TTTTGCCCAT
TCGGTGCTTT TGAAAAAAGA CGGGACCGTA TGGGTTTTGG GAAACAACGG CAAAGGACAG
TTGGGACTTC CCGAAGTATC GGCCGTAAAT GAGCCTGTCA TGATAAACGG TCTTTCAGGA
ATAAAATCGG TGGCTGCGGG AAGGGAGCAT ACACTGGCAT TGCAGGAAGA CGGTACTTTG
TGGGCGTGGG GAAACAATTA CAGCCTTCAA CTCATAGAGT ATATGGAAAG GGATCCTGAT
ACAAAAGAGA GATTTACAAG TATTCCGATT AAAGTTGAGA CTCATTCCGA TATCAAATAT
GTGGCGGCTA AATTTTCACG TACCCTCATA GTAAAAAATG ACGGTACTGT TTGGCTGTAT
TCGCTTCCTC CTATAAATAC CTCCTCGGAT GCCGAGTACA TGCCGTGGGA AATAAAAGGC
TTTGGGGATA TAAAGATGGC GGATATTGGG ACAGGACATA TAGTTGCACT AAGAGAAGAC
GGAACGGTGT GGACCTGGGG TGAAAATGTC TGGGGACAAT TGGGTAACGG TTGGCAGCAG
CACCACAACA TTCATACTTA TATTTATTTT GAGCCCAATC AGGCAAAGAA TCTCTCGGAT
ATTGTTTCGA TAGCCGCGGG AGATGCTCAT TCGGTGGCAT TGAAGAGTGA CGGAACTGTA
TGGACTTGGG GCAGCAACTT CAACGGCGAG CTTGGAAACG GTACGACTAC TTATATTTTG
GAGCCAAAAA AGGTTGAAGG TTTGGAGGAT ATAGTAGCCA TTGATGCCGG AATCGGCCAT
ACGGTGGCGT TGAAGGCTGA CGGAACGGTA TGGGTGTGGG GTAAAAACAG CTATGGTCAG
CTGGGAAACG GCACAACCAT GAGAAGCACT GTTCCGATAC AGGTAGAAGG ACTTGAAGGA
ATTGTGGCAA TACAAGCAGG TATGGAGTGC ACGATAGCAT ATAAAAATGA CGGAACGGTA
TGGGCATGGG GTAAAAATGA TTTTGGACAA TTAGGTGACG GAACTTTTGA AAACATATTA
AGGCCCGTAA AAGTATTTGA AAGAAAATGA
|
|---|
| Protein sequence | MRKYGLKKIV WMLGILCFLV VSLNTSIFAA DGKNVVLGDV NGDSKINAID VLLMKKYILK
VINDLPSDGV KAADVNADGQ INSIDFTWLK KYMLKAVEKF PGEASNNPDA VIQFESGFAH
SVLLKKDGTV WVLGNNGKGQ LGLPEVSAVN EPVMINGLSG IKSVAAGREH TLALQEDGTL
WAWGNNYSLQ LIEYMERDPD TKERFTSIPI KVETHSDIKY VAAKFSRTLI VKNDGTVWLY
SLPPINTSSD AEYMPWEIKG FGDIKMADIG TGHIVALRED GTVWTWGENV WGQLGNGWQQ
HHNIHTYIYF EPNQAKNLSD IVSIAAGDAH SVALKSDGTV WTWGSNFNGE LGNGTTTYIL
EPKKVEGLED IVAIDAGIGH TVALKADGTV WVWGKNSYGQ LGNGTTMRST VPIQVEGLEG
IVAIQAGMEC TIAYKNDGTV WAWGKNDFGQ LGDGTFENIL RPVKVFERK
|
|---|
| |