| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0256 |
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| Symbol | |
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| ID | 4808604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 313876 |
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| End bp | 316014 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640105668 |
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| Product | histidine kinase |
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| Protein accession | YP_001036688 |
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| Protein GI | 125972778 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1609] Transcriptional regulators
[COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC GCAGGACGAT TGGTTTTTTG GTTAACGACA TAGATGTAAG CTATTCCAAT
TTGGTTTACC TTATGACCAA AAAGGCCGCA GAAAAATATG ACTGCAACCT TATTGTTTAT
GAAGGCAGAT CTTTCAACAA CCCTTCCATG GCAGACAGCC AGCATCAAAT ATCCTACAGC
TTTGTTGACA ATACCCGTTT GGACGGAATA ATAATTACAA GTGCCACGAT TGCGTGCTTT
ATTTCCGATG AGGAATTTGT AGAATTTTGC AAACGTTATG AAGGAATACC TTTGGTATCG
CTGGGAATTG TTGTTCCCCA TGCCACCAGT ATTCTTGTGG ACAACAAACC GGGAATGAAA
AGCCAGGTGG AACATCTTAT AAAAGACCAT GGTTTTAAAA AAATTGTTTA TATATCCGGT
CCTCCGACAA ATACGGATTC GGTCGAACGT CTTGAAGCAT ACTGTGAAGC GCTGAGGGAA
AATGATATTG AGGTAGATGA CGGTCTGATA TTTTACGGGG ATTTTATGGC ACAATCCGGA
TATGACATTA TAAAAGAGAT AATAAAGAAC GGCATTGAGT ATGATGCGGT TGTTTGTGCA
AATGATGAGA TGGCTTTTGG AGCGATAAAA GGTATAAGGG ACTTAAAAGA CGCTTATAAT
CTCGACTTAA CCCAAAAAGG TGTGATATGC GGATTTGATG ATTCCATAAC GTCGCGACTG
GTCAAACCCT CTTTGACTAC GGTAAGACAG CCTATTGAAG AAATGTGTTT TTATGCGGTT
GAGGCAATTC TTAAAAAAAT AGAAGGAGAA AAAGTTGAAG ATGTGGTGAA ACTTCCTTCT
GTCCTGGTTA AAAGGGAATC CTGCGGCTGT AAAAACGCGG CCGAAGTGGA TTTTGTGAGT
GACAGCAGTC TAAGACTTGT TCCCGGTCAG AGGATACATG AGAATTTGCA GACATATTCC
CTGGATGAAT TATTTGACTG TATTACCAGA ACATTAAAAC TGTGTTCCAT CAGAAGCTGT
TTTATTTTCA AATATTGCGG CGGAACTTTG CTGTATGAGG TTGATTCTAT TTTCAGAGAC
GATTTTAGAC TGCCTGAGGA TTCCGAATTG ATATATGCTT ACTATAATGA CGAGAGAATA
ACCATAGAAG ACAGTATTAA ATATATAAAA ACAAGATGCA TTATACCGGA CCGGTTCTTT
AACGAAGACA GGCGGTTTAC ATATTTGGTT AATCCATTGT TTTTTTATGA CGAACACTTT
GGTTATGTGT GTTTTGAAGT AGCAAATGAT GATGTACTGA ACTTTGAACC TATCAGGGGT
CAGATAAGCA ACACGTTAAA CGGTGCGCTG ATGCTCATGG AAAGAGCCAA GATGGAAGAA
AGCCTCAGGG AGACGGAACG TCTTGCTTCG CTGGGACAGC TTATCGGAGG AATTTCCCAC
AATCTTATGA CTCCTATAAT GTCCATATCC GGAGCATGCT TTGGATTGGA AGACCTTGTG
CATGAATATA TGGCATCTAT AGAAGACCCT TCCGTTACGG TGCAGGACCA CAAGGAAATA
GCCAGGGACA TGCAGGAGTG GATAAACAAA CTCAAAGAAT ACAATTCGTA CATGTCGAAT
GTTATTGCAA CGGTCAAATC ACAAGCGGTC CAGCTTAATT CCGATGCGAT TAACGAGTTT
ACAATCGAAG AGCTTGTAGA CAGAGTTAAA TTTATAAAAA ACAATAACCC CCAGATCAGA
AAAGCCGTTT TAAACTGCAA AATTGATATT GACGGTAAAA CGGCAATTCG AGGGGATATA
TCCAATCTGG CACAGATAAT TGAAAATCTC TTGATTAATG CAGTGCAGTC TTATGAAGGA
ATGGATAATG CCAGTAACAT TGTTGATCTC CATATATTGA AAGAAGAAAA TATGGTCAAA
TGTATTGTCA GAGATTATGG GAAAGGCATA CCCAATGAAA TAAGAGACAG GCTGTTTAGG
CGAATGGTAA CCACAAAAGG TAAAAATGGA ACGGGACTGA GCCTGTTATT GTCCTATTCC
ACAATAAAGG GCAAGTTCGG AGGGGAATTG TGGGTGGAGT CAAAGGAAAA CGAAGGTTCT
GCGTTTTATG TAACGATACC TTTGACCGAC AGGGAATGA
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| Protein sequence | MKKRRTIGFL VNDIDVSYSN LVYLMTKKAA EKYDCNLIVY EGRSFNNPSM ADSQHQISYS
FVDNTRLDGI IITSATIACF ISDEEFVEFC KRYEGIPLVS LGIVVPHATS ILVDNKPGMK
SQVEHLIKDH GFKKIVYISG PPTNTDSVER LEAYCEALRE NDIEVDDGLI FYGDFMAQSG
YDIIKEIIKN GIEYDAVVCA NDEMAFGAIK GIRDLKDAYN LDLTQKGVIC GFDDSITSRL
VKPSLTTVRQ PIEEMCFYAV EAILKKIEGE KVEDVVKLPS VLVKRESCGC KNAAEVDFVS
DSSLRLVPGQ RIHENLQTYS LDELFDCITR TLKLCSIRSC FIFKYCGGTL LYEVDSIFRD
DFRLPEDSEL IYAYYNDERI TIEDSIKYIK TRCIIPDRFF NEDRRFTYLV NPLFFYDEHF
GYVCFEVAND DVLNFEPIRG QISNTLNGAL MLMERAKMEE SLRETERLAS LGQLIGGISH
NLMTPIMSIS GACFGLEDLV HEYMASIEDP SVTVQDHKEI ARDMQEWINK LKEYNSYMSN
VIATVKSQAV QLNSDAINEF TIEELVDRVK FIKNNNPQIR KAVLNCKIDI DGKTAIRGDI
SNLAQIIENL LINAVQSYEG MDNASNIVDL HILKEENMVK CIVRDYGKGI PNEIRDRLFR
RMVTTKGKNG TGLSLLLSYS TIKGKFGGEL WVESKENEGS AFYVTIPLTD RE
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