Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0242 |
Symbol | |
ID | 4808590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 292248 |
End bp | 293147 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640105654 |
Product | hypothetical protein |
Protein accession | YP_001036674 |
Protein GI | 125972764 |
COG category | [S] Function unknown |
COG ID | [COG4866] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00206072 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGATT TCAAACCTAT AGAGCTAAAA GACAGAGAAC TTTTTCATGA ATATTTAAAA GATTATGATT TTCTCACTTA TGAATATTCA TTTTTAACAC TTTATATATG GAGAAAAATG TACAATACAG AGTTTGCAAT AGTTGATGAC ACAATAGTCA TTAAAAAGCG CACCGCCAAC AACGGCACCT ATTTCATGCA GCCCATTGGG GCCGATAAAA GTAAAATTGC CGACATTACA TTAAAGCTCA ACACCTTAAG AAAAAACAAT CCCGACTTCA AATACCTCTA CGGTGACGTG GAAACACCTT TTTTAGAGCA GCTTCATGAA AATTTCGGAA ATCTCGTAAC ATCCCATGAG GACAAAAACA ATTTTGATTA TATTTTCAAC AGCAAGGATT TGATTAAACT GTCGGGCAAA AAATATCACA GAAAAAAGAA TCAGTACAAT CAATTCATAA AGAAATACGA TTATAGAATT GAAGAAATAC AAAGTCCTGA AGTTATAAAA AATTGTATTG ATTTGTCTCT TAAATGGTAT GATTATAAAT CCCTGCAAAG TGAACAGCTT AAAAACGAGC AAAAAGCCAT TTTCGATATT TTTAGCAATA TCAAAATCTT TAACAATATA AAAGGTATTG CTGTTTATGT AAATAACGAA ATAGCAGGGT TTGCAATAGG CGAAAAATTA AACAGCAAGA TGGCAACAGT TCACTTTGAA AAAGGAAATT ACAATTTTTC CGGCATTTAT CCGTTTCTAA ACAAATCTTT GGTGGAAATC TTCTTTCGCG ATGTGGAATT TATAAATCTT CAGGAAGACT TGGGTCTGGA AGGGTTGCGC AGAGCCAAGT CAGCTTATCA ACCCATAAAG TTGGAAAAAA AATATCTTGT AAACATATAA
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Protein sequence | MLDFKPIELK DRELFHEYLK DYDFLTYEYS FLTLYIWRKM YNTEFAIVDD TIVIKKRTAN NGTYFMQPIG ADKSKIADIT LKLNTLRKNN PDFKYLYGDV ETPFLEQLHE NFGNLVTSHE DKNNFDYIFN SKDLIKLSGK KYHRKKNQYN QFIKKYDYRI EEIQSPEVIK NCIDLSLKWY DYKSLQSEQL KNEQKAIFDI FSNIKIFNNI KGIAVYVNNE IAGFAIGEKL NSKMATVHFE KGNYNFSGIY PFLNKSLVEI FFRDVEFINL QEDLGLEGLR RAKSAYQPIK LEKKYLVNI
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